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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Oryza sativa-Class I SSR (IRGSP) 2005
(Reference Set)
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Correspondences
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Maps 11
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Class I SSR (IRGSP) 2005 [ View Map Set Info ]
Map Name: 11
Map Start: 0 bp
Map Stop: 28,383,233 bp
Features by Type:
826 SSR
826 Total

Map Features

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Items 1 to 25 of 826.       of 34 | Next
Oryza sativa - Class I SSR (IRGSP) 2005 - 11
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM26863 SSR 19,118,634 - 19,118,975 No other positions
RM26847 SSR 18,871,946 - 18,872,080 No other positions
RM26849 SSR 18,939,742 - 18,939,937 No other positions
RM26850 SSR 18,949,421 - 18,949,662 No other positions
RM26851 SSR 18,959,585 - 18,959,736 No other positions
RM26852 SSR 18,972,271 - 18,972,429 No other positions
RM26853 SSR 18,974,113 - 18,974,319 No other positions
RM26857 SSR 18,993,066 - 18,993,246 No other positions
RM26858 SSR 19,012,498 - 19,012,774 No other positions
RM26860 SSR 19,037,847 - 19,038,112 No other positions
RM26861 SSR 19,093,208 - 19,093,506 No other positions
RM26862 SSR 19,113,422 - 19,113,559 No other positions
RM26821 SSR 18,354,289 - 18,354,414 No other positions
RM26824 SSR 18,460,684 - 18,461,041 No other positions
RM26829 SSR 18,580,945 - 18,581,315 No other positions
RM26830 SSR 18,587,233 - 18,587,429 No other positions
RM26832 SSR 18,595,738 - 18,595,919 No other positions
RM26833 SSR 18,598,400 - 18,598,588 No other positions
RM26835 SSR 18,610,499 - 18,610,724 No other positions
RM26840 SSR 18,755,095 - 18,755,493 No other positions
RM26841 SSR 18,772,632 - 18,772,827 No other positions
RM26842 SSR 18,785,693 - 18,785,966 No other positions
RM26844 SSR 18,855,604 - 18,855,883 No other positions
RM26846 SSR 18,867,360 - 18,867,561 No other positions
RM26871 SSR 19,174,415 - 19,174,585 No other positions