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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Oryza sativa-Class I SSR (TIGR) 2005
(Reference Set)
Min.
Correspondences
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Maps 6
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Class I SSR (TIGR) 2005 [ View Map Set Info ]
Map Name: 6
Map Start: 0 bp
Map Stop: 31,168,202 bp
Features by Type:
964 SSR
964 Total

Map Features

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Items 1 to 25 of 964.       of 39 | Next
Oryza sativa - Class I SSR (TIGR) 2005 - 6
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM19228 SSR 163,184 - 163,416 No other positions
RM19230 SSR 194,163 - 194,318 No other positions
RM19234 SSR 222,424 - 222,722 No other positions
RM19235 SSR 246,077 - 246,446 No other positions
RM19236 SSR 265,861 - 265,947 No other positions
RM19237 SSR 292,104 - 292,503 No other positions
RM19238 SSR 292,956 - 293,124 No other positions
RM19239 SSR 347,344 - 347,497 No other positions
RM19242 SSR 396,110 - 396,385 No other positions
RM19245 SSR 453,270 - 453,361 No other positions
RM19248 SSR 467,351 - 467,467 No other positions
RM19250 SSR 484,581 - 484,954 No other positions
RM19254 SSR 533,917 - 534,112 No other positions
RM19255 SSR 534,683 - 534,843 No other positions
RM19258 SSR 570,225 - 570,497 No other positions
RM19260 SSR 578,152 - 578,310 No other positions
RM19261 SSR 578,601 - 579,090 No other positions
RM19262 SSR 713,020 - 713,260 No other positions
RM19267 SSR 804,628 - 804,770 No other positions
RM19268 SSR 818,228 - 818,427 No other positions
RM19269 SSR 884,803 - 885,074 No other positions
RM19270 SSR 895,177 - 895,369 No other positions
RM19271 SSR 905,680 - 905,955 No other positions
RM19272 SSR 921,226 - 921,561 No other positions
RM19274 SSR 1,010,481 - 1,010,720 No other positions