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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oryza sativa-Class I SSR (TIGR) 2005
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps 1
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Class I SSR (TIGR) 2005 [ View Map Set Info ]
Map Name: 1
Map Start: 0 bp
Map Stop: 43,219,134 bp
Features by Type:
1,574 SSR
1,574 Total

Map Features

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Items 1 to 25 of 1,574.       of 63 | Next
Oryza sativa - Class I SSR (TIGR) 2005 - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM10643 SSR 10,199,854 - 10,200,012 No other positions
RM10644 SSR 10,241,674 - 10,241,873 No other positions
RM10648 SSR 10,261,510 - 10,261,668 No other positions
RM10649 SSR 10,281,940 - 10,282,384 No other positions
RM10652 SSR 10,307,251 - 10,307,488 No other positions
RM10653 SSR 10,308,134 - 10,308,303 No other positions
RM10654 SSR 10,340,054 - 10,340,327 No other positions
RM10655 SSR 10,366,206 - 10,366,487 No other positions
RM10656 SSR 10,367,511 - 10,367,701 No other positions
RM10657 SSR 10,434,151 - 10,434,336 No other positions
RM10658 SSR 10,437,857 - 10,438,431 No other positions
RM10660 SSR 10,463,274 - 10,463,552 No other positions
RM10661 SSR 10,469,648 - 10,470,169 No other positions
RM10662 SSR 10,470,867 - 10,471,203 No other positions
RM10663 SSR 10,497,315 - 10,497,448 No other positions
RM10664 SSR 10,559,659 - 10,559,756 No other positions
RM10666 SSR 10,559,937 - 10,560,309 No other positions
RM10665 SSR 10,559,937 - 10,560,309 No other positions
RM10673 SSR 10,662,783 - 10,662,942 No other positions
RM10680 SSR 10,819,377 - 10,819,644 No other positions
RM10681 SSR 10,826,366 - 10,826,565 No other positions
RM10683 SSR 10,866,366 - 10,866,855 No other positions
RM10685 SSR 10,903,768 - 10,903,931 No other positions
RM10686 SSR 10,908,058 - 10,908,231 No other positions
RM10687 SSR 10,910,974 - 10,911,159 No other positions