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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO, 2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 45
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
RFLP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO, 2003 [ View Map Set Info ]
Map Name: 45
Map Start: 0 cM
Map Stop: 8.07 cM
Features by Type:
2 AFLP
1 RFLP
3 Total

Map Features

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Items 1 to 3 of 3.
Oat - Oat, KxO, 2003 - 45
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
bcd1882a RFLP 0 Oat - Cornell Kan/Ogl QTL 1995 - 2 Xbcd1882C RFLP 15.6 (cM) Marker Identity View Maps
Oat - Cornell Kan/Ogl QTL 1995 - 36 Xbcd1882B RFLP 28.4 (cM) Marker Identity View Maps
Oat - Cornell Kan/Ogl QTL 1995 - 36 AQDF286 QTL 22.4 - 25.2 (cM) qtl_marker View Maps
Oat - Cornell Kan/Ogl QTL 1995 - 2 AQDF114 QTL 24.5 - 27.5 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 2 BCD1882 RFLP 3,507,163 - 3,508,143 (bp) Marker Identity View Maps
Oat - Cornell Diploid 1995 - B BCD1882 RFLP 86 (cM) Marker Identity View Maps
E35/M61 AFLP 8.07 No other positions
P37/M47 AFLP 1.71 No other positions