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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Switchgrass-Okada 2010
(Reference Set)
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Maps VIb-m
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
STS
Other
 
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Switchgrass - Okada 2010 [ View Map Set Info ]
Map Name: VIb-m
Map Start: 0 cM
Map Stop: 81.14 cM
Features by Type:
6 SSR
40 STS
46 Total

Map Features

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Items 1 to 25 of 46.       of 2 | Next
Switchgrass - Okada 2010 - VIb-m
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
sww2796_198 STS 76.25 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g025670 Gene Prediction 54,659,457 - 54,663,562 () related_sequence View Maps
sww3035_187 STS 72.19 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g026170 Gene Prediction 61,346,440 - 61,349,076 () related_sequence View Maps
sww2272_210 STS 68.66 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g026630 Gene Prediction 61,756,864 - 61,757,864 () related_sequence View Maps
sww3047_168 STS 62.45 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g027690 Gene Prediction 62,649,488 - 62,653,519 () related_sequence View Maps
sww49_204 STS 58.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g023340 Gene Prediction 58,239,037 - 58,240,533 () related_sequence View Maps
sww2159_536 STS 35.59 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g012720 Gene Prediction 25,696,240 - 25,700,246 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 2 Sb02g002390 Gene Prediction 2,455,230 - 2,460,287 () related_sequence View Maps
sww2159_545 STS 35.59 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g012720 Gene Prediction 25,696,240 - 25,700,246 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 2 Sb02g002390 Gene Prediction 2,455,230 - 2,460,287 () related_sequence View Maps
sww3033_177 STS 20.47 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g002950 Gene Prediction 3,115,804 - 3,117,304 () related_sequence View Maps
sww3033_192 STS 20.47 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g002950 Gene Prediction 3,115,804 - 3,117,304 () related_sequence View Maps
sww381_215 STS 20.47 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g002950 Gene Prediction 3,115,804 - 3,117,304 () related_sequence View Maps
sww381_216 STS 20.47 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g002950 Gene Prediction 3,115,804 - 3,117,304 () related_sequence View Maps
sww971_180 STS 12.7 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g001620 Gene Prediction 1,903,885 - 1,906,020 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g001670 Gene Prediction 1,925,578 - 1,927,561 () related_sequence View Maps
sww456_269 STS 11.3 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g001550 Gene Prediction 1,762,525 - 1,765,711 () related_sequence View Maps
sww2580_207 STS 3.69 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g000625 Gene Prediction 448,614 - 448,937 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 1 Sb01g018170 Gene Prediction 18,874,567 - 18,874,848 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 1 Sb01g009730 Gene Prediction 8,502,005 - 8,503,090 () related_sequence View Maps
sww545_343 STS 0.88 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g000230 Gene Prediction 73,736 - 75,274 () related_sequence View Maps
sww545_346 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g000230 Gene Prediction 73,736 - 75,274 () related_sequence View Maps
sww3027_387 STS 81.14 No other positions
sww3027_413 STS 81.14 No other positions
sww2796_198 STS 76.25 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g025670 Gene Prediction 54,659,457 - 54,663,562 () related_sequence View Maps
sww3035_187 STS 72.19 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g026170 Gene Prediction 61,346,440 - 61,349,076 () related_sequence View Maps
sww3026_160 STS 71.67 No other positions
sww47_249 STS 69.9 No other positions
sww2272_210 STS 68.66 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g026630 Gene Prediction 61,756,864 - 61,757,864 () related_sequence View Maps
sww3047_168 STS 62.45 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g027690 Gene Prediction 62,649,488 - 62,653,519 () related_sequence View Maps
sww49_204 STS 58.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g023340 Gene Prediction 58,239,037 - 58,240,533 () related_sequence View Maps