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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Switchgrass-Okada 2010
(Reference Set)
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Correspondences
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Maps VIIb-f
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
STS
Other
 
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Switchgrass - Okada 2010 [ View Map Set Info ]
Map Name: VIIb-f
Map Start: 0 cM
Map Stop: 72 cM
Features by Type:
11 SSR
112 STS
123 Total

Map Features

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Items 1 to 25 of 123.       of 5 | Next
Switchgrass - Okada 2010 - VIIb-f
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
sww1718_285 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033690 Gene Prediction 61,613,899 - 61,615,636 () related_sequence View Maps
sww1569_220 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033570 Gene Prediction 61,497,844 - 61,498,826 () related_sequence View Maps
sww1718_276 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033690 Gene Prediction 61,613,899 - 61,615,636 () related_sequence View Maps
sww2112_235 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033450 Gene Prediction 61,388,766 - 61,391,658 () related_sequence View Maps
sww2480_352 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g034110 Gene Prediction 62,006,823 - 62,009,436 () related_sequence View Maps
sww2919_212 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033580 Gene Prediction 61,514,151 - 61,514,810 () related_sequence View Maps
sww2919_221 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033580 Gene Prediction 61,514,151 - 61,514,810 () related_sequence View Maps
sww3019_187 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033790 Gene Prediction 61,718,572 - 61,719,177 () related_sequence View Maps
sww3019_213 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033790 Gene Prediction 61,718,572 - 61,719,177 () related_sequence View Maps
sww577_239 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033790 Gene Prediction 61,718,572 - 61,719,177 () related_sequence View Maps
sww577_265 STS 5.15 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033790 Gene Prediction 61,718,572 - 61,719,177 () related_sequence View Maps
sww386_289 STS 7.16 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g033450 Gene Prediction 61,388,766 - 61,391,658 () related_sequence View Maps
sww2829_197 STS 15.58 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g031930 Gene Prediction 60,232,705 - 60,235,701 () related_sequence View Maps
sww2335_139 STS 17.29 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g022155 Gene Prediction 56,485,801 - 56,493,183 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 Sb03g034620 Gene Prediction 62,796,964 - 62,799,518 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 2 Sb02g034580 Gene Prediction 69,114,934 - 69,121,702 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 1 Sb01g007710 Gene Prediction 6,629,720 - 6,635,569 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g016110 Gene Prediction 44,543,194 - 44,544,080 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 4 Sb04g035180 Gene Prediction 65,026,393 - 65,037,041 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 1 Sb01g040100 Gene Prediction 63,488,868 - 63,492,310 () related_sequence View Maps
sww1675_549 STS 27.11 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g028680 Gene Prediction 57,438,047 - 57,439,054 () related_sequence View Maps
sww3008_176 STS 27.75 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g028280 Gene Prediction 57,103,323 - 57,106,028 () related_sequence View Maps
sww2209_251 STS 31.11 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g026220 Gene Prediction 55,269,469 - 55,270,137 () related_sequence View Maps
sww1589_203 STS 31.18 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g027000 Gene Prediction 55,983,526 - 55,985,616 () related_sequence View Maps
sww2209_253 STS 32.4 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g026220 Gene Prediction 55,269,469 - 55,270,137 () related_sequence View Maps
sww1_211 STS 37.33 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g025150 Gene Prediction 54,149,522 - 54,151,606 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 4 Sb04g037800 Gene Prediction 67,357,489 - 67,359,050 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 4 Sb04g032430 Gene Prediction 62,376,719 - 62,380,912 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g005390 Gene Prediction 7,484,674 - 7,492,346 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 4 Sb04g027660 Gene Prediction 57,562,353 - 57,564,270 () related_sequence View Maps
sww2415_224 STS 37.33 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g025150 Gene Prediction 54,149,522 - 54,151,606 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 4 Sb04g037800 Gene Prediction 67,357,489 - 67,359,050 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 4 Sb04g032430 Gene Prediction 62,376,719 - 62,380,912 () related_sequence View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 7 Sb07g005390 Gene Prediction 7,484,674 - 7,492,346 () related_sequence View Maps
sww2894_167 STS 37.33 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g024350 Gene Prediction 53,444,588 - 53,445,548 () related_sequence View Maps
sww3010_221 STS 37.33 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g024730 Gene Prediction 53,782,191 - 53,784,465 () related_sequence View Maps
sww3010_223 STS 37.33 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g024730 Gene Prediction 53,782,191 - 53,784,465 () related_sequence View Maps
sww2786_204 STS 40.73 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 6 Sb06g023600 Gene Prediction 52,660,805 - 52,661,955 () related_sequence View Maps