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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Switchgrass-Okada 2010
(Reference Set)
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Maps IVb-m
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
STS
Other
 
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Switchgrass - Okada 2010 [ View Map Set Info ]
Map Name: IVb-m
Map Start: 0 cM
Map Stop: 80.91 cM
Features by Type:
11 SSR
38 STS
49 Total

Map Features

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Items 1 to 25 of 49.       of 2 | Next
Switchgrass - Okada 2010 - IVb-m
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
sww1695_213 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g001600 Gene Prediction 1,280,253 - 1,282,189 () related_sequence View Maps
sww1830_187 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g002070 Gene Prediction 1,711,173 - 1,713,667 () related_sequence View Maps
sww1830_197 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g002070 Gene Prediction 1,711,173 - 1,713,667 () related_sequence View Maps
sww1696_232 STS 6.27 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g002560 Gene Prediction 2,264,432 - 2,266,012 () related_sequence View Maps
sww1695_219 STS 8.23 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g001600 Gene Prediction 1,280,253 - 1,282,189 () related_sequence View Maps
sww383_354 STS 19.14 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g009170 Gene Prediction 9,798,755 - 9,801,894 () related_sequence View Maps
sww383_377 STS 19.14 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g009170 Gene Prediction 9,798,755 - 9,801,894 () related_sequence View Maps
sww1967_225 STS 21.94 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008810 Gene Prediction 9,214,285 - 9,215,895 () related_sequence View Maps
sww1967_242 STS 21.94 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008810 Gene Prediction 9,214,285 - 9,215,895 () related_sequence View Maps
sww152_221 STS 24.62 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008090 Gene Prediction 8,110,238 - 8,115,151 () related_sequence View Maps
sww2079_216 STS 33.87 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g019720 Gene Prediction 42,169,611 - 42,173,726 () related_sequence View Maps
sww2079_222 STS 33.87 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g019720 Gene Prediction 42,169,611 - 42,173,726 () related_sequence View Maps
sww1959_164 STS 35.82 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g020590 Gene Prediction 44,780,515 - 44,780,961 () related_sequence View Maps
sww117_196 STS 49.72 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g024690 Gene Prediction 53,847,810 - 53,847,998 () related_sequence View Maps
sww1576_213 STS 65.4 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g028360 Gene Prediction 58,231,540 - 58,233,720 () related_sequence View Maps
sww705_276 STS 80.91 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g030460 Gene Prediction 60,091,845 - 60,095,621 () related_sequence View Maps
sww1695_213 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g001600 Gene Prediction 1,280,253 - 1,282,189 () related_sequence View Maps
sww1830_187 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g002070 Gene Prediction 1,711,173 - 1,713,667 () related_sequence View Maps
sww1830_197 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g002070 Gene Prediction 1,711,173 - 1,713,667 () related_sequence View Maps
sww1696_232 STS 6.27 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g002560 Gene Prediction 2,264,432 - 2,266,012 () related_sequence View Maps
sww1695_219 STS 8.23 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g001600 Gene Prediction 1,280,253 - 1,282,189 () related_sequence View Maps
sww383_354 STS 19.14 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g009170 Gene Prediction 9,798,755 - 9,801,894 () related_sequence View Maps
sww383_377 STS 19.14 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g009170 Gene Prediction 9,798,755 - 9,801,894 () related_sequence View Maps
sww1967_225 STS 21.94 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008810 Gene Prediction 9,214,285 - 9,215,895 () related_sequence View Maps
sww1967_242 STS 21.94 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008810 Gene Prediction 9,214,285 - 9,215,895 () related_sequence View Maps