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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Switchgrass-Okada 2010
(Reference Set)
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Correspondences
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Maps IVa-f
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
STS
Other
 
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Switchgrass - Okada 2010 [ View Map Set Info ]
Map Name: IVa-f
Map Start: 0 cM
Map Stop: 58.96 cM
Features by Type:
8 SSR
16 STS
24 Total

Map Features

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Items 1 to 24 of 24.
Switchgrass - Okada 2010 - IVa-f
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
sww1695_201 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g001600 Gene Prediction 1,280,253 - 1,282,189 () related_sequence View Maps
sww1967_215 STS 20.89 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008810 Gene Prediction 9,214,285 - 9,215,895 () related_sequence View Maps
sww1967_217 STS 20.89 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008810 Gene Prediction 9,214,285 - 9,215,895 () related_sequence View Maps
sww1858_390 STS 32.04 No other positions
sww1959_185 STS 33.85 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g020590 Gene Prediction 44,780,515 - 44,780,961 () related_sequence View Maps
sww1918_221 STS 36.79 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g022160 Gene Prediction 49,558,184 - 49,561,918 () related_sequence View Maps
sww1918_235 STS 36.79 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g022160 Gene Prediction 49,558,184 - 49,561,918 () related_sequence View Maps
sww705_281 STS 56.53 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g030460 Gene Prediction 60,091,845 - 60,095,621 () related_sequence View Maps
sww1695_201 STS 0 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g001600 Gene Prediction 1,280,253 - 1,282,189 () related_sequence View Maps
nfsg189_230 SSR 5.79 No other positions
nfsg189_240 SSR 8.46 No other positions
sww1967_215 STS 20.89 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008810 Gene Prediction 9,214,285 - 9,215,895 () related_sequence View Maps
sww1967_217 STS 20.89 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g008810 Gene Prediction 9,214,285 - 9,215,895 () related_sequence View Maps
sww1858_390 STS 32.04 No other positions
sww1959_185 STS 33.85 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g020590 Gene Prediction 44,780,515 - 44,780,961 () related_sequence View Maps
nfsg036_136 SSR 36.05 No other positions
nfsg036_149 SSR 36.05 No other positions
sww1918_221 STS 36.79 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g022160 Gene Prediction 49,558,184 - 49,561,918 () related_sequence View Maps
sww1918_235 STS 36.79 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g022160 Gene Prediction 49,558,184 - 49,561,918 () related_sequence View Maps
nfsg054_209 SSR 49.12 No other positions
nfsg054_218 SSR 49.12 No other positions
sww705_281 STS 56.53 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 10 Sb10g030460 Gene Prediction 60,091,845 - 60,095,621 () related_sequence View Maps
nfsg255_120 SSR 58.61 No other positions
nfsg255_126 SSR 58.96 No other positions