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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oryza sativa-Gramene IRGSP Assm 2005
(Reference Set)
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Maps Chr. 8
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Clone
EST
FPC
Genomic DNA
mRNA
RFLP
Other
 
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Gramene IRGSP Assm 2005 [ View Map Set Info ]
Map Name: Chr. 8
Map Start: 0 bp
Map Stop: 28,529,507 bp
Features by Type:
7,525 Clone
5 EST
366 FPC
31 Genomic DNA
400 mRNA
356 RFLP
8,683 Total

Map Features

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Items 1 to 25 of 8,683.       of 348 | Next
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 8
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
U31676 mRNA 1,527,722 - 1,528,053 No other positions
U31676 mRNA 1,527,538 - 1,527,627 No other positions
U31676 mRNA 1,527,327 - 1,527,410 No other positions
U31676 mRNA 1,526,955 - 1,527,097 No other positions
U31676 mRNA 1,526,433 - 1,526,530 No other positions
U31676 mRNA 1,526,290 - 1,526,350 No other positions
U31676 mRNA 1,526,060 - 1,526,206 No other positions
U31676 mRNA 1,524,460 - 1,524,491 No other positions
U31676 mRNA 1,524,625 - 1,524,648 No other positions
U31676 mRNA 1,524,764 - 1,524,864 No other positions
U31676 mRNA 1,525,152 - 1,525,267 No other positions
U31676 mRNA 1,525,360 - 1,525,459 No other positions
AB037416 mRNA 9,070,643 - 9,071,027 No other positions
AB037416 mRNA 9,071,677 - 9,071,913 No other positions
AB037416 mRNA 9,072,018 - 9,072,191 No other positions
AB037416 mRNA 9,072,874 - 9,073,013 No other positions
AB037416 mRNA 9,074,393 - 9,074,825 No other positions
AB013451 mRNA 27,077,683 - 27,078,819 No other positions
AB013451 mRNA 27,079,376 - 27,080,155 No other positions
AB013451 mRNA 27,083,546 - 27,085,627 No other positions
AB188247 mRNA 4,343,228 - 4,343,542 No other positions
AB188247 mRNA 4,345,257 - 4,345,389 No other positions
AB188247 mRNA 4,345,463 - 4,345,534 No other positions
AB188247 mRNA 4,345,871 - 4,346,014 No other positions
AB188247 mRNA 4,346,735 - 4,346,806 No other positions