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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oryza sativa-Gramene IRGSP Assm 2005
(Reference Set)
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Correspondences
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Maps Chr. 3
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Clone
EST
FPC
Genomic DNA
Marker
mRNA
RFLP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Gramene IRGSP Assm 2005 [ View Map Set Info ]
Map Name: Chr. 3
Map Start: 0 bp
Map Stop: 37,254,150 bp
Features by Type:
15,714 Clone
1 EST
690 FPC
130 Genomic DNA
2 Marker
1,138 mRNA
724 RFLP
18,399 Total

Map Features

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Items 1 to 25 of 18,399.       of 736 | Next
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
AB038234 mRNA 31,003,568 - 31,003,630 No other positions
AB038234 mRNA 31,003,718 - 31,004,003 No other positions
AB038234 mRNA 30,999,068 - 30,999,364 No other positions
AB038234 mRNA 30,999,474 - 30,999,524 No other positions
AB038234 mRNA 30,999,620 - 30,999,692 No other positions
AB038234 mRNA 30,999,924 - 31,000,042 No other positions
AB038234 mRNA 31,000,125 - 31,000,198 No other positions
AB038234 mRNA 31,000,390 - 31,000,510 No other positions
AB038234 mRNA 31,000,591 - 31,000,659 No other positions
AB038234 mRNA 31,000,824 - 31,000,865 No other positions
AB038234 mRNA 31,001,684 - 31,001,761 No other positions
AB038234 mRNA 31,002,733 - 31,002,791 No other positions
AB038234 mRNA 31,002,869 - 31,002,953 No other positions
AB038234 mRNA 31,003,252 - 31,003,340 No other positions
AB038234 mRNA 31,003,430 - 31,003,492 No other positions
U31773 mRNA 8,935,024 - 8,935,212 No other positions
U31773 mRNA 8,937,591 - 8,938,150 No other positions
U31773 mRNA 8,938,236 - 8,938,424 No other positions
AB037900 mRNA 1,590,857 - 1,591,266 No other positions
AB037900 mRNA 1,591,661 - 1,591,728 No other positions
AB037900 mRNA 1,591,795 - 1,591,896 No other positions
AB037900 mRNA 1,592,062 - 1,592,189 No other positions
AB037900 mRNA 1,592,266 - 1,592,357 No other positions
AB037900 mRNA 1,592,462 - 1,592,533 No other positions
AB037900 mRNA 1,592,628 - 1,592,696 No other positions