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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oryza sativa-Gramene IRGSP Assm 2005
(Reference Set)
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Maps Chr. 2
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Clone
FPC
Genomic DNA
mRNA
RFLP
Other
 
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Gramene IRGSP Assm 2005 [ View Map Set Info ]
Map Name: Chr. 2
Map Start: 0 bp
Map Stop: 36,817,842 bp
Features by Type:
14,218 Clone
599 FPC
60 Genomic DNA
827 mRNA
568 RFLP
16,272 Total

Map Features

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Items 1 to 25 of 16,272.       of 651 | Next
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
AF271995 mRNA 8,206,817 - 8,207,345 No other positions
AF271995 mRNA 8,207,721 - 8,208,107 No other positions
AF271995 mRNA 8,208,617 - 8,209,615 No other positions
AF271995 mRNA 8,209,699 - 8,209,853 No other positions
AF271995 mRNA 8,210,625 - 8,210,712 No other positions
AF271995 mRNA 8,210,801 - 8,210,904 No other positions
AF271995 mRNA 8,211,227 - 8,211,449 No other positions
AF271995 mRNA 8,212,151 - 8,212,235 No other positions
AF271995 mRNA 8,212,325 - 8,212,716 No other positions
AF271995 mRNA 8,212,818 - 8,213,157 No other positions
AF242298 mRNA 35,973,101 - 35,973,370 No other positions
AF242298 mRNA 35,973,472 - 35,973,535 No other positions
AF242298 mRNA 35,973,635 - 35,973,925 No other positions
AF242298 mRNA 35,974,123 - 35,974,367 No other positions
AF242298 mRNA 35,974,778 - 35,974,857 No other positions
AF242298 mRNA 35,975,258 - 35,975,374 No other positions
AF242298 mRNA 35,975,518 - 35,976,370 No other positions
AF242298 mRNA 35,976,449 - 35,976,556 No other positions
D38010 mRNA 17,814,487 - 17,814,545 No other positions
D38010 mRNA 17,814,661 - 17,814,733 No other positions
D38010 mRNA 17,815,331 - 17,815,659 No other positions
D38010 mRNA 17,816,297 - 17,816,472 No other positions
D38010 mRNA 17,816,685 - 17,816,894 No other positions
AB037371 mRNA 27,905,213 - 27,908,230 No other positions
L43362 mRNA 29,564,265 - 29,564,521 No other positions