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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oryza sativa-Gramene IRGSP Assm 2005
(Reference Set)
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Maps Chr. 10
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Clone
FPC
Genomic DNA
mRNA
RFLP
Other
 
Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Gramene IRGSP Assm 2005 [ View Map Set Info ]
Map Name: Chr. 10
Map Start: 0 bp
Map Stop: 23,660,978 bp
Features by Type:
5,969 Clone
292 FPC
52 Genomic DNA
319 mRNA
257 RFLP
6,889 Total

Map Features

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Items 1 to 25 of 6,889.       of 276 | Next
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 10
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
AF284781 mRNA 22,938,210 - 22,938,791 No other positions
AF284781 mRNA 22,938,944 - 22,939,238 No other positions
AF284781 mRNA 22,939,359 - 22,939,471 No other positions
AF284781 mRNA 22,939,584 - 22,939,768 No other positions
AF284781 mRNA 22,939,909 - 22,940,056 No other positions
AF284781 mRNA 22,940,152 - 22,940,430 No other positions
AF284781 mRNA 22,940,512 - 22,940,616 No other positions
AF284781 mRNA 22,940,791 - 22,941,033 No other positions
AF284781 mRNA 22,941,573 - 22,941,719 No other positions
AF261271 mRNA 22,303,111 - 22,303,830 No other positions
AF261271 mRNA 22,304,176 - 22,304,360 No other positions
AF261271 mRNA 22,304,497 - 22,304,606 No other positions
AF261271 mRNA 22,304,710 - 22,304,989 No other positions
AF261272 mRNA 22,314,368 - 22,314,653 No other positions
AF261272 mRNA 22,314,748 - 22,314,857 No other positions
AF261272 mRNA 22,315,107 - 22,315,291 No other positions
AF261272 mRNA 22,315,870 - 22,316,522 No other positions
AF261274 mRNA 22,285,439 - 22,286,283 No other positions
AF261274 mRNA 22,286,456 - 22,286,565 No other positions
AF261274 mRNA 22,286,670 - 22,286,948 No other positions
AF261277 mRNA 21,920,303 - 21,920,540 No other positions
AF261277 mRNA 21,920,824 - 21,920,933 No other positions
AF261277 mRNA 21,921,312 - 21,922,066 No other positions
U09450 mRNA 4,320,387 - 4,320,688 No other positions
U09450 mRNA 4,320,986 - 4,321,042 No other positions