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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Maize-IBM2 2008 Neighbors
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - IBM2 2008 Neighbors [ View Map Set Info ]
Map Name: 9
Map Start: -54 cM
Map Stop: 692 cM
Features by Type:
1 Centromere
2 Chromosomal Segment
1 Cytological Structure
320 Gene
3 Gene candidate
1 Lapsed locus
10 Point
898 Probed site
17 RFLP
2 Telomere
1 Transposable element
1,256 Total

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Items 1 to 25 of 1,256.       of 51 | Next
Maize - IBM2 2008 Neighbors - 9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
agrr118b Probed site -41.5 Maize - UMC 1998 - 9 agrr118b RFLP 0 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 6 agrr118a RFLP 79.8 (cM) maizegdb_to_gramene View Maps
K9S Cytological Structure -13.5 No other positions
gpm363a Probed site -12.7 No other positions
Dt1 Transposable element -12 No other positions
bnl9.07a Probed site -11.2 Maize - BNL 1996 - 9 bnl9.07a RFLP 4.4 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 9 bnl9.07a RFLP 10.1 (cM) maizegdb_to_gramene View Maps
Maize - BNL 1996 - 5 bnl9.07b RFLP 171.6 (cM) maizegdb_to_gramene View Maps
pyd1 Chromosomal Segment -10.5 No other positions
v28 Lapsed locus -9.58 Oryza sativa - JRGP RFLP 2000 - 4 V28 RFLP 10.7 (cM) maizegdb_to_gramene View Maps
Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 4 V28 RFLP 10.7 (cM) maizegdb_to_gramene View Maps
Maize - Bins - 9 yg2 Gene 0 - 15.5 (bins) maizegdb_to_gramene View Maps
Maize - Maize Bins QTL 2005 - 9 yg2 Gene 0 - 15.5 (cM) maizegdb_to_gramene View Maps
gpm563c Probed site -9.1 No other positions
wd1 Chromosomal Segment -9 No other positions
umc1279 Probed site -7.6 Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 umc1279 RFLP 28,436,811 - 28,437,097 (bp) maizegdb_to_gramene View Maps
Maize - AGI FPC Oct 2004 - ctg356 umc1279 RFLP 113 - 124 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg368 umc1279 RFLP 124 (bands) maizegdb_to_gramene View Maps
Maize - Curated AGI FPC Oct 2004 - ctg356.9 umc1279 RFLP 113 - 124 (bands) maizegdb_to_gramene View Maps
IDP7828 Probed site -6.62 No other positions
IDP4079 Probed site -3.1 No other positions
TIDP6666 Probed site -3.1 No other positions
umc1957 Probed site 0 Maize - AGI FPC Oct 2004 - ctg356 umc1957 RFLP 525 - 550 (bands) maizegdb_to_gramene View Maps
Maize - IBM 2002 - 9 umc1957 RFLP 0 (cM) maizegdb_to_gramene View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 6 umc1957 RFLP 6,952,898 - 6,953,211 (bp) maizegdb_to_gramene View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 2 umc1957 RFLP 31,108,252 - 31,108,325 (bp) maizegdb_to_gramene View Maps
Maize - SSR IBM 2001 - 9 umc1957 RFLP 0 (cM) maizegdb_to_gramene View Maps
Maize - Curated AGI FPC Oct 2004 - ctg356.9 umc1957 RFLP 525 - 550 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg368 umc1957 RFLP 537 (bands) maizegdb_to_gramene View Maps
telomere9S Telomere 0 No other positions
umc109 Probed site 5 Maize - Maize Bins QTL 2005 - 9 umc109 RFLP 15.5 (cM) maizegdb_to_gramene View Maps
Maize - Bins - 9 umc109 RFLP 15.5 (bins) maizegdb_to_gramene View Maps
Sorghum - UGA BTx623/IS3620C RL SSR RFLP - 10 Xumc109.2 RFLP 51.1 (cM) maizegdb_to_gramene View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 9 umc109 RFLP 0 (cM) maizegdb_to_gramene View Maps
Maize - Curated AGI FPC Oct 2004 - ctg246.5 umc109 RFLP 279 - 296 (bands) maizegdb_to_gramene View Maps
Maize - AGI FPC Oct 2004 - ctg356 umc109 RFLP 533 - 536 (bands) maizegdb_to_gramene View Maps
Maize - AGI FPC Oct 2004 - ctg246 umc109 RFLP 279 - 296 (bands) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 9 umc109 RFLP 15.5 (cM) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg368 Xumc109.2 RFLP 552 (bands) maizegdb_to_gramene View Maps
Sorghum - Klein 2004 - LG-10 umc109 RFLP 64.3 - 68.1 (cM) maizegdb_to_gramene View Maps
Maize - UWM B73/Mo17 QTL 1996 - 9 umc109 RFLP 0 (cM) maizegdb_to_gramene View Maps
Maize - Cyto FISH 2007 - Chr. 9 umc109 FISH probe -79 (cMc) maizegdb_to_gramene View Maps
Maize - IBM 2002 - 9 umc109 RFLP 5 (cM) maizegdb_to_gramene View Maps
Maize - SSR IBM 2001 - 9 umc109 RFLP 5.4 (cM) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg251 umc109.A RFLP 287 (bands) maizegdb_to_gramene View Maps
Maize - Curated AGI FPC Oct 2004 - ctg356.9 umc109 RFLP 533 - 536 (bands) maizegdb_to_gramene View Maps
pin1 Gene candidate 5.04 Maize - FPC maize May 2006 - ctg251 CL464_3_ov OVERGO 386 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg184 CL464_3_ov OVERGO 28 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg147 CL464_3_ov OVERGO 90 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg368 CL464_3_ov OVERGO 601 (bands) maizegdb_to_gramene View Maps
umc148 Probed site 7.3 Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 9 UMC148 RFLP 4 (cM) maizegdb_to_gramene View Maps
IDP4980 Probed site 7.58 No other positions
umc2594 Probed site 9.59 No other positions
gpm441 Probed site 9.71 No other positions
rz144a Probed site 9.86 Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 6 RZ144 RFLP 6,720,737 - 6,720,901 (bp) maizegdb_to_gramene View Maps
Oryza sativa - TTU IR64/Orufi RI QTL 2003 - 6 RZ144B RFLP 64.1 (cM) maizegdb_to_gramene View Maps
Oryza sativa - Zejiang IR64/Azu DH QTL 2001 - 6 RZ144 RFLP 33.4 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 9 rz144a RFLP 17.4 (cM) maizegdb_to_gramene View Maps
Oryza sativa - Cornell IR64/Azu DH QTL 2001 - 6 RZ144 RFLP 41.9 (cM) maizegdb_to_gramene View Maps
Maize - Cornell Wilson 1999 - 9 rz144a RFLP 13.6 (cM) maizegdb_to_gramene View Maps
Oryza sativa - CNHZAU Bal/Dul//Naj11 QTL 1998 - 6 RZ144 RFLP 29.6 (cM) maizegdb_to_gramene View Maps
Oryza sativa - Cornell V20A/glab QTL 2004 - 6 RZ144 RFLP 38 (cM) maizegdb_to_gramene View Maps
Maize - Cyto FISH 2007 - Chr. 9 rz144a FISH probe -82 (cMc) maizegdb_to_gramene View Maps
Sorghum - Paterson 2003 - F RZ144B RFLP 74.7 (cM) maizegdb_to_gramene View Maps
Oryza sativa - Zhejian IR1552/Azu RI QTL 2001 - 6 RZ144 RFLP 29.2 (cM) maizegdb_to_gramene View Maps
Oryza sativa - Cornell 9024/LH422 RI QTL 1996 - 6 RZ144 RFLP 46.5 (cM) maizegdb_to_gramene View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 6 RZ144 RFLP 16.4 (cM) maizegdb_to_gramene View Maps
Maize - Cornell Wilson 1999 - 6 RZ144B RFLP 67.4 (cM) maizegdb_to_gramene View Maps
Oryza sativa - CNZU Azu/IR1552 RI QTL 2004 - 6 RZ144 RFLP 23.1 (cM) maizegdb_to_gramene View Maps
Oryza sativa - JRGP RFLP 2000 - 6 V73 RFLP 37.8 (cM) maizegdb_to_gramene View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 6 RZ144 RFLP 6,718,648 - 6,718,800 (bp) maizegdb_to_gramene View Maps
Sorghum - Mace 2009 - 10 RZ144 RFLP 45.6 (cM) maizegdb_to_gramene View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 6 RZ144 RFLP 6,718,648 - 6,718,800 (bp) maizegdb_to_gramene View Maps
Oryza sativa - UCD Lab/Bla QTL 1998 - 6 RZ144 RFLP 137 (cM) maizegdb_to_gramene View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 6 RZ144 RFLP 12.6 (cM) maizegdb_to_gramene View Maps
Sorghum - Paterson 2003 - I rz144a RFLP 56.2 (cM) maizegdb_to_gramene View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 1994 - 6 RZ144 RFLP 32.6 (cM) maizegdb_to_gramene View Maps
Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 6 V73 RFLP 37.8 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 6 RZ144B RFLP 80.7 (cM) maizegdb_to_gramene View Maps
Oryza sativa - JNIG W1944/Peik QTL 2002 - 6 RZ144 RFLP 259.5 (cM) maizegdb_to_gramene View Maps
Oryza sativa - Cornell SSR 2001 - 6 RZ144 RFLP 41.9 (cM) maizegdb_to_gramene View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 6 RZ144 RFLP 6,720,737 - 6,720,901 (bp) maizegdb_to_gramene View Maps
Oryza sativa - CNZU Azu/IR1552 RI QTL 2003 - 6 RZ144 RFLP 23.1 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 9 rz144c RFLP 21.4 (cM) maizegdb_to_gramene View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 6 RZ144 RFLP 41.7 (cM) maizegdb_to_gramene View Maps
Oryza sativa - CIRAD IR64/Azu DH QTL 2003 - 6 RZ144 RFLP 54.7 (cM) maizegdb_to_gramene View Maps
bnlg1724 Probed site 11.8 Maize - Curated AGI FPC Oct 2004 - ctg356.9 bnlg1724 RFLP 722 - 731 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg368 bnlg1724 RFLP 734 (bands) maizegdb_to_gramene View Maps
Maize - SSR IBM 2001 - 9 bnlg1724 RFLP 12.2 (cM) maizegdb_to_gramene View Maps
Maize - IBM 2002 - 9 bnlg1724 RFLP 11.8 (cM) maizegdb_to_gramene View Maps
Maize - AGI FPC Oct 2004 - ctg356 bnlg1724 RFLP 722 - 731 (bands) maizegdb_to_gramene View Maps
koln10b(hox2) Probed site 11.88 No other positions
bnlg1272a Probed site 12.02 Maize - AGI FPC Oct 2004 - ctg43 bnlg1272 RFLP 186 - 206 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg415 bnlg1272 RFLP 464 (bands) maizegdb_to_gramene View Maps
Maize - AGI FPC Oct 2004 - ctg245 bnlg1272 RFLP 964 - 986 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg250 bnlg1272 RFLP 975 (bands) maizegdb_to_gramene View Maps
Maize - AGI FPC Oct 2004 - ctg392 bnlg1272 RFLP 577 - 608 (bands) maizegdb_to_gramene View Maps
Maize - Curated AGI FPC Oct 2004 - ctg407.10 bnlg1272 RFLP 438 - 455 (bands) maizegdb_to_gramene View Maps
Maize - Curated AGI FPC Oct 2004 - ctg392.10 bnlg1272 RFLP 577 - 608 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg399 bnlg1272 RFLP 592 (bands) maizegdb_to_gramene View Maps
Maize - Curated AGI FPC Oct 2004 - ctg245.5 bnlg1272 RFLP 964 - 986 (bands) maizegdb_to_gramene View Maps
Maize - AGI FPC Oct 2004 - ctg407 bnlg1272 RFLP 438 - 455 (bands) maizegdb_to_gramene View Maps
Maize - Curated AGI FPC Oct 2004 - ctg43.1 bnlg1272 RFLP 186 - 206 (bands) maizegdb_to_gramene View Maps
Maize - FPC maize May 2006 - ctg48 bnlg1272 RFLP 196 (bands) maizegdb_to_gramene View Maps