grain_iconCMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley genes 2 - 1997
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley genes 2 - 1997 [ View Map Set Info ]
Map Name: 5H
Map Start: -59 cM
Map Stop: 104 cM
Features by Type:
40 Gene
40 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 40.       of 2 | Next
Barley - Barley genes 2 - 1997 - 5H
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
abo12 Gene 104 No other positions
ari-e Gene 2 No other positions
blf1 Gene 22 No other positions
cer-i Gene -4 No other positions
cer-t Gene -16 No other positions
cer-w Gene -27 No other positions
cer-zj Gene -5 No other positions
cer-zp Gene -7 No other positions
com1 Gene 3 No other positions
crm1 Gene -28 No other positions
cud1 Gene 43 No other positions
ddt Gene 66 No other positions
dex1 Gene 61 No other positions
dsk Gene -18 No other positions
ert-g Gene 1 No other positions
ert-n Gene 1 No other positions
fch6 Gene 48 No other positions
fst1 Gene 27 No other positions
glo-b Gene 46 No other positions
lax-a Gene 5 No other positions
lbi1 Gene -47 No other positions
Ltc Gene -23 No other positions
lys1 Gene -11 No other positions
lys3 Gene 42 No other positions
msg16 Gene 78 No other positions