grain_iconCMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Composite 2004
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
Clone
Gene
Marker
RAPD
RFLP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat - Composite 2004 [ View Map Set Info ]
Map Name: 5D
Map Start: 0 cM
Map Stop: 120 cM
Features by Type:
12 AFLP
11 Clone
3 Gene
1 Marker
1 RAPD
50 RFLP
78 SSR
156 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 156.       of 7 | Next
Wheat - Composite 2004 - 5D
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Xbarc130 SSR 0 Wheat - Wheat composite QTL 2004 - 5D Xbarc130 SSR 0 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5D Xbarc130-5D SSR 3.5 (cM) Marker Identity View Maps
Xmta10 RFLP 0 No other positions
Xwmc233 SSR 0 Wheat - Wheat composite QTL 2004 - 5D Xwmc233 SSR 0 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5D Xwmc233-5D SSR 0 (cM) Marker Identity View Maps
Xcfd165 SSR 0 Wheat - Wheat composite QTL 2004 - 5D Xcfd165 SSR 0 (cM) Marker Identity View Maps
Xmta9 RFLP 0 Wheat - Wheat composite QTL 2004 - 5D Xmta9 RFLP 0 (cM) Marker Identity View Maps
Wheat - wEST 2003 - 5D 5DS2-0.78-1.00 Breakpoint Interval -1 - -0.78 (Arm fraction) Wheat EST Breakpoint Interval View Maps
Xgwm190 SSR 5 Wheat - Consensus SSR 2004 - 5D Xgwm190-5D SSR 8.9 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D Xgwm190 SSR 5 (cM) Marker Identity View Maps
Xgpw326 SSR 6 Wheat - Wheat composite QTL 2004 - 5D Xgpw326 SSR 6 (cM) Marker Identity View Maps
Xgwm192 SSR 8 Wheat - AAFCCRC Wuhan1/ Marin QTL 2003 - 4B AQFO005 QTL 0 - 31 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 4D Xgwm192.3 SSR 69 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 4D Xgwm192-4D SSR 34.5 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D Xgwm192 SSR 8 (cM) Marker Identity View Maps
Wheat - AAFCCRC Wuhan1/ Marin QTL 2003 - 4B Xgwm192-4B SSR 18 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 4B Xgwm192.2 SSR 36 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 4A Xgwm192.1 SSR 29 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 4B Xgwm192-4B SSR 28.9 (cM) Marker Identity View Maps
Xgwm205.1 SSR 9 Wheat - Wheat composite QTL 2004 - 5A Xgwm205a SSR 7 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5A Xgwm205-5A SSR 32.8 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5A Xgwm205b SSR 39 (cM) Marker Identity View Maps
Tetraploid wheat - ICARDA Omra/T.dico QTL 2004 - 5A Xgwm205-5A.2 SSR 32.3 (cM) Marker Identity View Maps
Wheat - AAFCCRC Wuhan1/ Marin QTL 2003 - 5A Xgwm205-5A SSR 44.4 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5D Xgwm205-5D SSR 16.4 (cM) Marker Identity View Maps
Tetraploid wheat - ICARDA Omra/T.dico QTL 2004 - 5A Xgwm205-5A.1 SSR 30.2 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D Xgwm205.1 SSR 9 (cM) Marker Identity View Maps
Xfba114 RFLP 9 Wheat - Wheat composite QTL 2004 - 5D Xfba114 RFLP 9 (cM) Marker Identity View Maps
Wheat - wEST 2003 - 5B 5BS5-0.71-0.81 Breakpoint Interval -0.81 - -0.71 (Arm fraction) Wheat EST Breakpoint Interval View Maps
Wheat - Cornell Synthetic/Opata 1995 - 5D Xfba114-5D RFLP 6.3 (cM) Marker Identity View Maps
Wheat - wEST 2003 - 5D 5DS2-0.78-1.00 Breakpoint Interval -1 - -0.78 (Arm fraction) Wheat EST Breakpoint Interval View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 5D Xfba114-5D RFLP 6.3 (cM) Marker Identity View Maps
Xfba393b RFLP 10 Wheat - Wheat composite QTL 2004 - 5B Xfba393b RFLP 40 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5B Xfba393b RFLP 10 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 5B Xfba393-5B RFLP 17.9 (cM) Marker Identity View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 5D Xfba393-5D RFLP 0 (cM) Marker Identity View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 5B Xfba393-5B RFLP 17.9 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 1A Xfba393 RFLP 21 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 5D Xfba393-5D RFLP 0 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5B Xfba393a RFLP 17 (cM) Marker Identity View Maps
Xbarc205 SSR 11 Wheat - Wheat composite QTL 2004 - 5D Xbarc205 SSR 11 (cM) Marker Identity View Maps
Xfbb238 RFLP 13 Wheat - Synthetic/Opata RI RFLP/SSR QT - 7A Xfbb238-7A RFLP 230.3 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 5D Xfbb238-5D RFLP 9.4 (cM) Marker Identity View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 5D Xfbb238-5D RFLP 9.4 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 7A Xfbb238-7A RFLP 230.3 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5B Xfbb238 RFLP 13 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5B Xfbb238 RFLP 16 (cM) Marker Identity View Maps
Xgwm358 SSR 13 Wheat - Wheat composite QTL 2004 - 2D Xgwm358b SSR 0 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5D Xgwm358-5D SSR 26.2 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 2D Xgwm358-2D SSR 65.5 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D Xgwm358 SSR 13 (cM) Marker Identity View Maps
Xwmc434a SSR 15 Wheat - Wheat composite QTL 2004 - 2B Xwmc434a SSR 15 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D Xwmc434b SSR 68 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 2B Xwmc434a SSR 105 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 2B Xwmc434-2B SSR 49.8 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5D Xwmc434-5D SSR 67.2 (cM) Marker Identity View Maps
Xfba137 RFLP 16 Wheat - Synthetic/Opata RI RFLP/SSR QT - 5D Xfba137-5D RFLP 14.9 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D Xfba137 RFLP 16 (cM) Marker Identity View Maps
Wheat - wEST 2003 - 5D 5DS2-0.78-1.00 Breakpoint Interval -1 - -0.78 (Arm fraction) Wheat EST Breakpoint Interval View Maps
Wheat - Cornell Synthetic/Opata 1995 - 5D Xfba137-5D RFLP 14.9 (cM) Marker Identity View Maps
Xbarc143 SSR 16 Wheat - Consensus SSR 2004 - 5D Xbarc143-5D SSR 23.4 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D Xbarc143 SSR 16 (cM) Marker Identity View Maps
XgbxR958 RFLP 17 Wheat - Wheat composite QTL 2004 - 5D XgbxR958 RFLP 17 (cM) Marker Identity View Maps
Xgdm68 SSR 18 Wheat - Wheat composite QTL 2004 - 5D Xgdm68 SSR 18 (cM) Marker Identity View Maps
XksuD30 RFLP 20 Wheat - Synthetic/Opata RI RFLP/SSR QT - 5D XksuD30-5D RFLP 19.8 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D XksuD30 RFLP 20 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 5D XksuD30-5D RFLP 19.8 (cM) Marker Identity View Maps
Xwmc150.2 SSR 20 Wheat - Wheat composite QTL 2004 - 5A Xwmc150c SSR 29 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 7D Xwmc150-7D SSR 105.2 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 7D Xwmc150g SSR 152 (cM) Marker Identity View Maps
Wheat - AAFCCRC Wuhan1/ Marin QTL 2003 - 5A AQFO006 QTL 0 - 28 (cM) qtl_marker View Maps
Wheat - AAFCCRC Wuhan1/ Marin QTL 2003 - 5A Xwmc150-5A SSR 7.5 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5D Xwmc150-5D SSR 21.6 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 5D Xwmc150.2 SSR 20 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5A Xwmc150-5A SSR 56.7 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 6A Xwmc150-6A SSR 40.4 (cM) Marker Identity View Maps
Xbarc44 SSR 20 Wheat - Wheat composite QTL 2004 - 5D Xbarc44 SSR 20 (cM) Marker Identity View Maps
Xgwm16 SSR 21 Wheat - Wheat composite QTL 2004 - 2B Xgwm16 SSR 21 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 2B Xgwm16 SSR 97 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5D Xgwm16-5D SSR 26.8 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 2B Xgwm16 SSR 44 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 2B Xgwm16-2B SSR 82.8 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 7B Xgwm16-7B SSR 58.1 (cM) Marker Identity View Maps
Xwmc318 SSR 21 Wheat - Wheat composite QTL 2004 - 5D Xwmc318 SSR 21 (cM) Marker Identity View Maps
Wheat - Consensus SSR 2004 - 5D Xwmc318-5D SSR 24.7 (cM) Marker Identity View Maps
Xcfd74 SSR 23 Wheat - Wheat composite QTL 2004 - 5D Xcfd74 SSR 23 (cM) Marker Identity View Maps