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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Oryza sativa-Class I SSR (93-11) 2005
(Reference Set)
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Correspondences
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Maps 9
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Class I SSR (93-11) 2005 [ View Map Set Info ]
Map Name: 9
Map Start: 0 bp
Map Stop: 21,724,131 bp
Features by Type:
443 SSR
443 Total

Map Features

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Items 1 to 25 of 443.       of 18 | Next
Oryza sativa - Class I SSR (93-11) 2005 - 9
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM15072 SSR 21,056,609 - 21,056,773 No other positions
RM17818 SSR 3,979,212 - 3,979,439 No other positions
RM17819 SSR 3,979,212 - 3,979,439 No other positions
RM17820 SSR 3,979,212 - 3,979,439 No other positions
RM18529 SSR 8,183,701 - 8,184,071 No other positions
RM18530 SSR 8,183,701 - 8,184,071 No other positions
RM23662 SSR 139,730 - 139,873 Oryza sativa - CIAT SSR 2006 - 9 RM23662 SSR 0.6 (cM) Marker Identity View Maps
RM23668 SSR 336,554 - 336,698 No other positions
RM23669 SSR 361,410 - 361,847 No other positions
RM23677 SSR 474,888 - 475,070 No other positions
RM23678 SSR 564,813 - 565,304 No other positions
RM23679 SSR 578,135 - 578,304 No other positions
RM23680 SSR 587,270 - 587,361 No other positions
RM23681 SSR 634,347 - 634,539 No other positions
RM23683 SSR 690,406 - 690,689 No other positions
RM23686 SSR 711,070 - 711,263 No other positions
RM23698 SSR 849,936 - 850,317 No other positions
RM23703 SSR 1,053,454 - 1,053,629 No other positions
RM23715 SSR 1,406,711 - 1,407,048 No other positions
RM23722 SSR 1,836,283 - 1,836,771 No other positions
RM23736 SSR 2,126,028 - 2,126,184 No other positions
RM23741 SSR 2,466,360 - 2,466,775 No other positions
RM23742 SSR 2,501,151 - 2,501,344 No other positions
RM23743 SSR 2,523,056 - 2,523,328 No other positions
RM23744 SSR 2,964,774 - 2,965,075 No other positions