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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oryza sativa-Class I SSR (93-11) 2005
(Reference Set)
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Correspondences
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Class I SSR (93-11) 2005 [ View Map Set Info ]
Map Name: 1
Map Start: 0 bp
Map Stop: 47,261,377 bp
Features by Type:
1,104 SSR
1,104 Total

Map Features

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Items 1 to 25 of 1,104.       of 45 | Next
Oryza sativa - Class I SSR (93-11) 2005 - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM21412 SSR 11,518,395 - 11,519,027 No other positions
RM18291 SSR 21,860,551 - 21,860,743 No other positions
RM12289 SSR 47,261,270 - 47,261,377 No other positions
RM12288 SSR 47,259,701 - 47,259,897 No other positions
RM12281 SSR 47,098,416 - 47,098,475 No other positions
RM12280 SSR 47,080,823 - 47,081,198 No other positions
RM12279 SSR 47,078,717 - 47,079,298 No other positions
RM12276 SSR 47,067,157 - 47,067,325 No other positions
RM12271 SSR 47,039,352 - 47,039,632 No other positions
RM12270 SSR 47,022,276 - 47,022,582 No other positions
RM12269 SSR 46,965,725 - 46,965,812 No other positions
RM12261 SSR 46,947,815 - 46,947,983 No other positions
RM12256 SSR 46,892,216 - 46,892,359 No other positions
RM12255 SSR 46,885,988 - 46,886,086 No other positions
RM12254 SSR 46,860,312 - 46,860,509 No other positions
RM12253 SSR 46,853,529 - 46,853,867 No other positions
RM12251 SSR 46,822,746 - 46,822,908 No other positions
RM12250 SSR 46,820,158 - 46,820,516 No other positions
RM12249 SSR 46,808,583 - 46,809,134 No other positions
RM12248 SSR 46,808,583 - 46,809,134 No other positions
RM12247 SSR 46,779,013 - 46,779,327 No other positions
RM12246 SSR 46,779,013 - 46,779,327 No other positions
RM12242 SSR 46,710,016 - 46,710,295 No other positions
RM12240 SSR 46,631,773 - 46,632,023 No other positions
RM12239 SSR 46,631,399 - 46,631,552 No other positions