grain_iconCMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-FPC maize May 2006
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps ctg69
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Clone
EST
FPC
Genomic DNA
Marker
OVERGO
RFLP
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Maize - FPC maize May 2006 [ View Map Set Info ]
Map Name: ctg69
Map Start: 0 bands
Map Stop: 715 bands
Features by Type:
438 Clone
1 EST
1 FPC
1 Genomic DNA
1 Marker
155 OVERGO
16 RFLP
6 STS
619 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 619.       of 25 | Next
Maize - FPC maize May 2006 - ctg69
(Click headers to resort)
Comparative Maps
Feature Type Position (bands) Map Feature Type Position Evidence Actions
ctg69 FPC 1 - 715 Maize - FPC Chr maize May 2006 - 2 ctg69 FPC 53,914,701 - 57,418,200 (bp) Marker Identity View Maps
ZMMBBb0583G09 Clone 82 - 105 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0583G09 Clone 82 - 105 (bands) Marker Identity View Maps
ZMMBBc0402N18 Clone 115 - 142 Maize - Curated AGI FPC Oct 2004 - ctg60.2 c0402N18 Clone 115 - 142 (bands) Marker Identity View Maps
ZMMBBb0250I16 Clone 195 - 216 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0250I16 Clone 195 - 216 (bands) Marker Identity View Maps
Maize - AGI FPC Oct 2004 - ctg60 umc1227 RFLP 195 - 198 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg60.2 umc1227 RFLP 195 - 198 (bands) hybridisation View Maps
ZMMBBb0337L11 Clone 329 - 351 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0337L11 Clone 329 - 351 (bands) Marker Identity View Maps
ZMMBBb0589O09 Clone 214 - 249 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0589O09 Clone 214 - 249 (bands) Marker Identity View Maps
ZMMBBb0360A06 Clone 463 - 485 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0360A06 Clone 463 - 485 (bands) Marker Identity View Maps
ZMMBBb0529N18 Clone 532 - 561 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0529N18 Clone 532 - 561 (bands) Marker Identity View Maps
ZMMBBb0266B22 Clone 519 - 542 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0266B22 Clone 519 - 542 (bands) Marker Identity View Maps
ZMMBBb0314L01 Clone 6 - 39 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0314L01 Clone 6 - 39 (bands) Marker Identity View Maps
ZMMBBb0200P08 Clone 131 - 153 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0200P08 Clone 131 - 153 (bands) Marker Identity View Maps
ZMMBBc0350K10 Clone 285 - 322 Maize - Curated AGI FPC Oct 2004 - ctg60.2 c0350K10 Clone 285 - 322 (bands) Marker Identity View Maps
ZMMBBc0249K08 Clone 272 - 309 Maize - Curated AGI FPC Oct 2004 - ctg60.2 c0249K08 Clone 272 - 309 (bands) Marker Identity View Maps
ZMMBBb0146B03 Clone 660 - 682 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0146B03 Clone 660 - 682 (bands) Marker Identity View Maps
ZMMBBc0545B17 Clone 333 - 358 Maize - Curated AGI FPC Oct 2004 - ctg60.2 c0545B17 Clone 333 - 358 (bands) Marker Identity View Maps
ZMMBBc0455O07 Clone 437 - 464 Maize - Curated AGI FPC Oct 2004 - ctg60.2 c0455O07 Clone 437 - 464 (bands) Marker Identity View Maps
ZMMBBc0342C01 Clone 509 - 559 Maize - Curated AGI FPC Oct 2004 - ctg60.2 c0342C01 Clone 509 - 559 (bands) Marker Identity View Maps
ZMMBBb0526L02 Clone 131 - 153 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0526L02 Clone 131 - 153 (bands) Marker Identity View Maps
ZMMBBb0434A03 Clone 82 - 109 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0434A03 Clone 82 - 109 (bands) Marker Identity View Maps
ZMMBBb0368A14 Clone 690 - 708 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0368A14 Clone 690 - 708 (bands) Marker Identity View Maps
ZMMBBb0363I09 Clone 649 - 670 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0363I09 Clone 649 - 670 (bands) Marker Identity View Maps
ZMMBBb0415K01 Clone 586 - 612 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0415K01 Clone 586 - 612 (bands) Marker Identity View Maps
ZMMBBb0370G14 Clone 80 - 110 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0370G14 Clone 80 - 110 (bands) Marker Identity View Maps
ZMMBBb0505J12 Clone 682 - 697 Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0505J12 Clone 682 - 697 (bands) Marker Identity View Maps
ZMMBBb0080A20 Clone 4 - 36 Maize - AGI FPC Oct 2004 - ctg418 dd1506 OVERGO 71 - 86 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg180 dd1506 OVERGO 39 - 61 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg32 dd1506 OVERGO 876 - 895 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg60.2 b0080A20 Clone 4 - 36 (bands) Marker Identity View Maps
Maize - AGI FPC Oct 2004 - ctg309 dd1506 OVERGO 58 - 62 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg249 dd1506 OVERGO 530 - 556 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg60.2 umc2382 RFLP 4 - 36 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg401 dd1506 OVERGO 1,831 - 1,871 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg341 dd1506 OVERGO 504 - 510 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg374 dd1506 OVERGO 33 - 246 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg104 dd1506 OVERGO 673 - 703 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg112 dd1506 OVERGO 3,096 - 3,125 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg46 dd1506 OVERGO 504 - 508 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg225 dd1506 OVERGO 725 - 750 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg215 dd1506 OVERGO 108 - 149 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg261 dd1506 OVERGO 192 - 201 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg431 dd1506 OVERGO 524 - 559 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg386 dd1506 OVERGO 373 - 376 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg275 dd1506 OVERGO 108 - 144 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg330 dd1506 OVERGO 562 - 597 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg395 dd1506 OVERGO 348 - 360 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg315 dd1506 OVERGO 1,740 - 3,252 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg124 dd1506 OVERGO 1,194 - 1,210 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg192.4 umc2382 RFLP 380 - 397 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg264 dd1506 OVERGO 1,309 - 1,311 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg241 dd1506 OVERGO 193 - 199 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg60 umc2382 RFLP 4 - 36 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg10 dd1506 OVERGO 868 - 899 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg21 dd1506 OVERGO 1,035 - 1,054 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg450 dd1506 OVERGO 228 - 270 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg445 dd1506 OVERGO 875 - 884 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg408 dd1506 OVERGO 499 - 529 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg192 umc2382 RFLP 380 - 397 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg171 dd1506 OVERGO 210 - 237 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg35 dd1506 OVERGO 1,555 - 1,565 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg272 dd1506 OVERGO 649 - 650 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg131 dd1506 OVERGO 285 - 317 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg67 dd1506 OVERGO 36 - 39 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg360 dd1506 OVERGO 29 - 35 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg157 dd1506 OVERGO 1,231 - 1,265 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg150 dd1506 OVERGO 148 - 162 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg245 dd1506 OVERGO 1,088 - 1,105 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg44 dd1506 OVERGO 1,491 - 1,506 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg13 dd1506 OVERGO 789 - 798 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg60 dd1506 OVERGO 24 - 34 (bands) hybridisation View Maps