grain_iconCMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-FPC maize May 2006
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps ctg412
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Clone
FPC
mRNA
OVERGO
RFLP
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Maize - FPC maize May 2006 [ View Map Set Info ]
Map Name: ctg412
Map Start: 0 bands
Map Stop: 1,606 bands
Features by Type:
947 Clone
1 FPC
2 mRNA
208 OVERGO
13 RFLP
8 STS
1,179 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 1,179.       of 48 | Next
Maize - FPC maize May 2006 - ctg412
(Click headers to resort)
Comparative Maps
Feature Type Position (bands) Map Feature Type Position Evidence Actions
ctg412 FPC 1 - 1,606 Maize - FPC Chr maize May 2006 - 10 ctg412 FPC 98,000,001 - 105,869,400 (bp) Marker Identity View Maps
ZMMBBb0050K22 Clone 835 - 864 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0050K22 Clone 835 - 864 (bands) Marker Identity View Maps
ZMMBBb0612O03 Clone 626 - 658 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0612O03 Clone 626 - 658 (bands) Marker Identity View Maps
ZMMBBc0069B18 Clone 1,229 - 1,261 Maize - Curated AGI FPC Oct 2004 - ctg403.10 c0069B18 Clone 1,229 - 1,261 (bands) Marker Identity View Maps
ZMMBBc0112C22 Clone 232 - 270 Maize - AGI FPC Oct 2004 - ctg403 dd1834 OVERGO 232 - 235 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg81 dd1834 OVERGO 178 - 203 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg403.10 c0112C22 Clone 232 - 270 (bands) Marker Identity View Maps
ZMMBBb0412O08 Clone 135 - 153 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0412O08 Clone 135 - 153 (bands) Marker Identity View Maps
ZMMBBb0115I02 Clone 1,267 - 1,286 Maize - AGI FPC Oct 2004 - ctg403 dd2400 OVERGO 1,267 - 1,271 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0115I02 Clone 1,267 - 1,286 (bands) Marker Identity View Maps
Maize - AGI FPC Oct 2004 - ctg98 dd2400 OVERGO 1,853 - 1,875 (bands) hybridisation View Maps
ZMMBBb0121C14 Clone 1,042 - 1,059 Maize - AGI FPC Oct 2004 - ctg403 dd337 OVERGO 1,048 - 1,055 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg132 dd337 OVERGO 118 - 305 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg68 dd337 OVERGO 1,344 - 1,373 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg114 dd337 OVERGO 678 - 708 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg9 dd337 OVERGO 520 - 556 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg279 dd337 OVERGO 1,165 - 1,167 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg407 dd337 OVERGO 12 - 31 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg167 dd337 OVERGO 519 - 530 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg4 dd337 OVERGO 117 - 220 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg302 dd337 OVERGO 414 - 442 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg506 dd337 OVERGO 53 - 89 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg166 dd337 OVERGO 672 - 688 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0121C14 Clone 1,042 - 1,059 (bands) Marker Identity View Maps
Maize - AGI FPC Oct 2004 - ctg31 dd337 OVERGO 127 - 130 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg451 dd337 OVERGO 76 - 92 (bands) hybridisation View Maps
ZMMBBc0157O04 Clone 1,239 - 1,271 Maize - Curated AGI FPC Oct 2004 - ctg403.10 c0157O04 Clone 1,239 - 1,271 (bands) Marker Identity View Maps
ZMMBBb0101E20 Clone 67 - 87 Maize - AGI FPC Oct 2004 - ctg232 dd1115 OVERGO 1,076 - 1,096 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0101E20 Clone 67 - 87 (bands) Marker Identity View Maps
Maize - AGI FPC Oct 2004 - ctg70 dd1115 OVERGO 8 - 32 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg403 dd1115 OVERGO 71 - 74 (bands) hybridisation View Maps
ZMMBBb0281K19 Clone 1,236 - 1,259 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0281K19 Clone 1,236 - 1,259 (bands) Marker Identity View Maps
ZMMBBb0404M08 Clone 536 - 559 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0404M08 Clone 536 - 559 (bands) Marker Identity View Maps
ZMMBBc0088E11 Clone 1,418 - 1,455 Maize - AGI FPC Oct 2004 - ctg105 SOG5855 OVERGO 252 - 296 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg115 SOG5855 OVERGO 1,431 - 1,462 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg107 SOG5855 OVERGO 1,559 - 1,588 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg434 SOG5855 OVERGO 290 - 330 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg292 SOG1722 OVERGO 231 - 262 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg365 SOG5855 OVERGO 2,002 - 2,026 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg374 SOG5855 OVERGO 941 - 943 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg100 SOG5855 OVERGO 174 - 209 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg258 SOG5855 OVERGO 821 - 838 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg186 SOG5855 OVERGO 188 - 208 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg110 SOG5855 OVERGO 924 - 1,725 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg41 SOG1722 OVERGO 428 - 440 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg10 SOG5855 OVERGO 37 - 59 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg242 SOG5855 OVERGO 159 - 192 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg403.10 c0088E11 Clone 1,418 - 1,455 (bands) Marker Identity View Maps
Maize - AGI FPC Oct 2004 - ctg309 SOG5855 OVERGO 1,835 - 2,165 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg245 SOG5855 OVERGO 22 - 1,362 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg439 SOG5855 OVERGO 15 - 40 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg270 SOG5855 OVERGO 866 - 883 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg73 SOG5855 OVERGO 1 - 42 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg35 SOG5855 OVERGO 22 - 40 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg461 SOG5855 OVERGO 611 - 625 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg290 SOG5855 OVERGO 368 - 397 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg213 SOG5855 OVERGO 519 - 536 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg206 SOG5855 OVERGO 329 - 358 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg458 SOG5855 OVERGO 416 - 443 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg400 SOG5855 OVERGO 797 - 823 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg40 SOG5855 OVERGO 57 - 87 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg72 SOG5855 OVERGO 1,869 - 1,893 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg255 SOG5855 OVERGO 1,964 - 1,988 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg104 SOG5855 OVERGO 243 - 265 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg403 SOG1722 OVERGO 1,418 - 1,455 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg303 SOG5855 OVERGO 464 - 493 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg144 SOG5855 OVERGO 85 - 102 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg232 SOG5855 OVERGO 332 - 450 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg80 SOG5855 OVERGO 1,956 - 1,975 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg24 SOG5855 OVERGO 606 - 637 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg25 SOG5855 OVERGO 1,239 - 1,257 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg49 SOG5855 OVERGO 70 - 83 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg387 SOG5855 OVERGO 1,294 - 1,314 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg164 SOG5855 OVERGO 1,447 - 1,477 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg348 SOG5855 OVERGO 347 - 383 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg68 SOG5855 OVERGO 911 - 948 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg78 SOG5855 OVERGO 2,243 - 2,284 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg44 SOG5855 OVERGO 206 - 242 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg344 SOG5855 OVERGO 678 - 696 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg403 SOG5855 OVERGO 1,418 - 1,435 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg315 SOG5855 OVERGO 2,743 - 2,757 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg39 SOG5855 OVERGO 161 - 168 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg471 SOG5855 OVERGO 132 - 153 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg152 SOG5855 OVERGO 204 - 241 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg538 SOG1722 OVERGO 12 - 24 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg356 SOG5855 OVERGO 1,413 - 1,441 (bands) hybridisation View Maps
ZMMBBb0214P01 Clone 62 - 81 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0214P01 Clone 62 - 81 (bands) Marker Identity View Maps
ZMMBBb0508K17 Clone 1,089 - 1,102 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0508K17 Clone 1,089 - 1,102 (bands) Marker Identity View Maps
ZMMBBb0293P02 Clone 1,356 - 1,374 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0293P02 Clone 1,356 - 1,374 (bands) Marker Identity View Maps
ZMMBBb0374H07 Clone 804 - 832 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0374H07 Clone 804 - 832 (bands) Marker Identity View Maps
ZMMBBb0359O11 Clone 188 - 216 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0359O11 Clone 188 - 216 (bands) Marker Identity View Maps
ZMMBBc0383A06 Clone 732 - 757 Maize - Curated AGI FPC Oct 2004 - ctg403.10 c0383A06 Clone 732 - 757 (bands) Marker Identity View Maps
ZMMBBc0410A20 Clone 614 - 655 Maize - Curated AGI FPC Oct 2004 - ctg403.10 c0410A20 Clone 614 - 655 (bands) Marker Identity View Maps
ZMMBBb0151H17 Clone 1,517 - 1,535 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0151H17 Clone 1,517 - 1,535 (bands) Marker Identity View Maps
ZMMBBb0186G15 Clone 173 - 192 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0186G15 Clone 173 - 192 (bands) Marker Identity View Maps
ZMMBBc0138C09 Clone 1,219 - 1,247 Maize - Curated AGI FPC Oct 2004 - ctg403.10 c0138C09 Clone 1,219 - 1,247 (bands) Marker Identity View Maps
ZMMBBb0331M15 Clone 180 - 199 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0331M15 Clone 180 - 199 (bands) Marker Identity View Maps
ZMMBBb0611I06 Clone 579 - 599 Maize - Curated AGI FPC Oct 2004 - ctg403.10 b0611I06 Clone 579 - 599 (bands) Marker Identity View Maps