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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Sorghum-Klein 2004
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sorghum - Klein 2004 [ View Map Set Info ]
Map Name: LG-03
Map Start: 0 cM
Map Stop: 202.4 cM
Features by Type:
310 AFLP
7 EST
6 Marker
38 RFLP
22 SSR
383 Total

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Items 1 to 25 of 383.       of 16 | Next
Sorghum - Klein 2004 - LG-03
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BG047875 EST 184.6 - 190 Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 TA22380_4558 EST Cluster 72,307,409 - 72,308,915 () EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 PUT-157a-Sorghum_bicolor-6924 EST Cluster 57,408,239 - 57,409,487 () EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 PUT-157a-Sorghum_bicolor-6924 EST Cluster 57,406,678 - 57,407,247 () EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 Sbi.14304 EST Cluster 57,406,678 - 57,409,487 () EST cluster View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 Sbi.14304 EST Cluster 72,307,587 - 72,308,914 () EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 TC102384 EST Cluster 57,408,383 - 57,409,487 () EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 TA22380_4558 EST Cluster 57,408,239 - 57,409,487 () EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 TA22380_4558 EST Cluster 40,961,887 - 40,962,275 (bp) EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 TC102384 EST Cluster 57,406,992 - 57,407,247 () EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 Sbi.14304 EST Cluster 57,406,992 - 57,407,247 () EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 Sbi.14304 EST Cluster 40,961,823 - 40,962,275 (bp) EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 TA22380_4558 EST Cluster 57,406,678 - 57,407,247 () EST cluster View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 PUT-157a-Sorghum_bicolor-6924 EST Cluster 72,307,409 - 72,308,915 () EST cluster View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 TC102384 EST Cluster 72,307,483 - 72,308,915 () EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 PUT-157a-Sorghum_bicolor-6924 EST Cluster 40,961,823 - 40,962,275 (bp) EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 Sbi.14304 EST Cluster 57,410,932 - 57,411,980 () EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 TC102384 EST Cluster 40,961,953 - 40,962,275 (bp) EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 Sbi.14304 EST Cluster 57,408,383 - 57,408,422 () EST cluster View Maps
txa376 AFLP 16.7 Sorghum - TAMU FPC 2004 - ctg2867 txa376 AFLP 1 - 23 (bands) Marker Identity View Maps
txa552 AFLP 16.7 - 20.3 No other positions
txa2671 AFLP 49.4 - 51.8 No other positions
txa3410 AFLP 76.1 - 79.5 Sorghum - TAMU FPC 2004 - ctg69 txa3410 AFLP 22 - 83 (bands) Marker Identity View Maps
CDO920 RFLP 81.9 Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 1 CQF1 QTL 90.9 - 110.2 (cM) qtl_marker View Maps
Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 1 V139 RFLP 87.4 (cM) Marker Identity View Maps
Oryza sativa - UCD Lab/Bla QTL 1998 - 1 AQEO003 QTL 98 - 104 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEN076-BLRS QTL 20,598,332 - 20,599,810 (bp) qtl_marker View Maps
Oryza sativa - Zhejian IR1552/Azu RI QTL 2001 - 1 CQS5 QTL 25.1 - 30.4 (cM) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQEN051 QTL 84.9 (cM) qtl_marker View Maps
Oryza sativa - CNHZAU Pei/8902 QTL 1999 - 12 AQCO132 QTL 72.3 (cM) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 CQAX2 QTL 71 - 97.7 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQN5-SPROTCN QTL 6,736,882 - 39,129,065 (bp) qtl_marker View Maps
Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 1 CQN51 QTL 38.8 - 106.2 (cM) qtl_marker View Maps
Oryza sativa - CNHZAU Pei/8902 QTL 1999 - 12 AQCO134 QTL 72.3 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEN051-BLRS QTL 20,598,332 - 20,599,810 (bp) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 1994 - 1 CDO920 RFLP 94 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQS5-SRTLG QTL 10,491,017 - 21,701,719 (bp) qtl_marker View Maps
Maize - IBM2 2008 Neighbors - 3 cdo920b(egl) Probed site 714.07 (cM) maizegdb_to_gramene View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEP015-SDLVIG QTL 11,077,466 - 21,701,719 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CDO920 RFLP 21,701,482 - 21,701,719 (bp) Marker Identity View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQEN076 QTL 84.9 (cM) qtl_marker View Maps
Maize - Bins - 8 Bin 8.05 Maize Bin 81 - 105.5 (bins) Maize bin marker View Maps
Maize - Bins - 3 Bin 3.09 Maize Bin 139.9 - 164.8 (bins) Maize bin marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEN042-BLRS QTL 20,598,332 - 20,599,810 (bp) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQHP019 QTL 71 (cM) qtl_marker View Maps
Oryza sativa - UCD Lab/Bla QTL 1998 - 1 CDO920 RFLP 98 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQAX2-PTHT QTL 14,620,467 - 21,701,719 (bp) qtl_marker View Maps
Oryza sativa - CNHZAU Pei/8902 QTL 1999 - 12 CDO920 RFLP 72.3 (cM) Marker Identity View Maps
Oryza sativa - CNZU Azu/IR1552 RI QTL 2004 - 1 CD0920 RFLP 51.6 (cM) Marker Identity View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 1 CDO920 RFLP 67.5 (cM) Marker Identity View Maps
Sorghum - Mace 2009 - 3 CDO920 RFLP 57.5 - 58.3 (cM) Marker Identity View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQEN077 QTL 84.9 (cM) qtl_marker View Maps
Oryza sativa - Cornell V20A/glab QTL 2004 - 1 CDO920 RFLP 96 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CDO920 RFLP 21,698,025 - 21,699,237 (bp) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQF1-RUBISCONICNRO QTL 22,077,133 - 26,193,239 (bp) qtl_marker View Maps
Maize - Maize Bins QTL 2005 - 8 Bin 8.05 Maize Bin 81 - 105.5 (cM) Maize bin marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CDO920 RFLP 21,700,988 - 21,701,716 (bp) Marker Identity View Maps
Maize - UMC 1998 - 3 cdo920b(egl) RFLP 143.8 (cM) Marker Identity View Maps
Oryza sativa - CNZU Azu/IR1552 RI QTL 2003 - 1 CD0920 RFLP 51.6 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQHP057-DRTL QTL 29,184,260 - 29,184,844 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQN51-SPKNB QTL 6,736,882 - 39,129,065 (bp) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQEN042 QTL 84.9 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQHP065-DRTL QTL 29,184,260 - 29,184,844 (bp) qtl_marker View Maps
Oryza sativa - UCD Lab/Bla QTL 1998 - 1 AQEP015 QTL 32 - 98 (cM) qtl_marker View Maps
Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 1 CQE1 QTL 90.9 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEN077-BLRS QTL 20,598,332 - 20,599,810 (bp) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQEN011 QTL 71 - 97.7 (cM) qtl_marker View Maps
Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 1 CQN5 QTL 38.8 - 106.2 (cM) qtl_marker View Maps
Wild rice - Minnesota John/Dor F2 QTL 2000 - 1b CDO920 RFLP 145 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEN011-BLRS QTL 14,620,467 - 21,701,719 (bp) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQHP065 QTL 60.1 (cM) qtl_marker View Maps
Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 1 CQN26 QTL 38.8 - 106.2 (cM) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQHP057 QTL 60.1 (cM) qtl_marker View Maps
Maize - IBM2 2008 Neighbors - 8 cdo920a(egl) Probed site 374.17 (cM) maizegdb_to_gramene View Maps
Oryza sativa - Zhejian IR1552/Azu RI QTL 2001 - 1 CD0920 RFLP 45.2 (cM) Marker Identity View Maps
Oryza sativa - JRGP Nip/Kas F2 QTL 2000 - 1 CQN43 QTL 38.8 - 106.2 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQN43-PNWT QTL 6,736,882 - 39,129,065 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQE1-CHLCN QTL 22,077,133 - 22,077,613 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQHP019-RTSHRO QTL 21,698,025 - 21,701,719 (bp) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQEN056 QTL 84.9 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - C CDO920 RFLP 41.7 (cM) Marker Identity View Maps
Oryza sativa - JRGP RFLP 2000 - 1 V139 RFLP 87.4 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 3 Bin 3.09 Maize Bin 139.9 - 164.8 (cM) Maize bin marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQHP035-RTDWTTINBRO QTL 21,698,025 - 21,701,719 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEN018-BLRS QTL 14,620,467 - 21,701,719 (bp) qtl_marker View Maps
Wild rice - Minnesota John/Dor F2 QTL 2000 - 1b AQK021 QTL 145 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEL009-RTNB QTL 21,623,851 - 21,701,719 (bp) qtl_marker View Maps
Sorghum - Paterson 2003 - A CDO0920 RFLP 59.3 (cM) Marker Identity View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQEN018 QTL 71 - 97.7 (cM) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQHP035 QTL 71 (cM) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 AQEN001 QTL 48.9 - 97.7 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQN26-LFSNS QTL 6,736,882 - 39,129,065 (bp) qtl_marker View Maps
Oryza sativa - CNZU Azu/IR1552 RI QTL 2003 - 1 AQEL009 QTL 51.6 - 61.2 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEO003-SPKFRT QTL 21,698,025 - 23,118,656 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEN056-BLRS QTL 20,598,332 - 20,599,810 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEN001-BLRS QTL 14,620,467 - 34,940,769 (bp) qtl_marker View Maps
Oryza sativa - IRRI Mor/CO39 QTL 1994 - 1 CDO920 RFLP 71 (cM) Marker Identity View Maps
txa6175 AFLP 81.9 - 84.3 Sorghum - TAMU FPC 2004 - ctg1838 txa6175 AFLP 4 - 27 (bands) Marker Identity View Maps
txa6157 AFLP 84.3 - 88.2 Sorghum - TAMU FPC 2004 - ctg701 txa6157 AFLP 9 - 47 (bands) Marker Identity View Maps
txa3836 AFLP 84.3 - 88.2 No other positions
txa2735 AFLP 98.8 No other positions
txa242 AFLP 98.8 - 102.6 No other positions
txa2826 AFLP 98.8 - 102.6 No other positions
txa2595 AFLP 111.6 No other positions
txp2 SSR 111.6 - 118.4 Sorghum - Mace 2009 - 3 txp2 SSR 91.7 (cM) Marker Identity View Maps
txa6188 AFLP 118.4 - 125.2 No other positions
BG556153 EST 118.4 - 125.2 Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 PUT-157a-Sorghum_bicolor-4524892 EST Cluster 26,790,841 - 26,794,220 (bp) EST cluster View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 Sbi.184 EST Cluster 58,326,256 - 58,328,110 () EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 Sbi.184 EST Cluster 14,073,308 - 14,074,044 () EST cluster View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 TC96786 EST Cluster 58,328,073 - 58,330,055 () EST cluster View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 PUT-157a-Sorghum_bicolor-4524892 EST Cluster 58,326,188 - 58,330,055 () EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 5 TA26079_4558 EST Cluster 28,280,100 - 28,282,116 (bp) EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 TA26079_4558 EST Cluster 26,790,841 - 26,794,220 (bp) EST cluster View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 TA26079_4558 EST Cluster 58,326,188 - 58,330,055 () EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 Sbi.184 EST Cluster 26,790,841 - 26,792,190 (bp) EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 TA26079_4558 EST Cluster 14,073,308 - 14,074,044 () EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 TC96786 EST Cluster 26,792,932 - 26,794,220 (bp) EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 5 TC96786 EST Cluster 28,280,100 - 28,281,380 (bp) EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 5 Sbi.184 EST Cluster 28,281,406 - 28,282,116 (bp) EST cluster View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 5 PUT-157a-Sorghum_bicolor-4524892 EST Cluster 28,280,100 - 28,282,116 (bp) EST cluster View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 PUT-157a-Sorghum_bicolor-4524892 EST Cluster 14,073,308 - 14,074,044 () EST cluster View Maps
txa389 AFLP 125.2 No other positions
txa2110 AFLP 125.2 No other positions
txa4131 AFLP 130.1 - 133.3 Sorghum - TAMU FPC 2004 - ctg1553 txa4131 AFLP 3 - 40 (bands) Marker Identity View Maps
txa3295 AFLP 130.1 - 133.3 Sorghum - TAMU FPC 2004 - ctg1897 txa3295 AFLP 5 - 21 (bands) Marker Identity View Maps
Sorghum - TAMU FPC 2004 - ctg3086 txa3295 AFLP 1 - 62 (bands) Marker Identity View Maps
txa54 AFLP 130.1 - 133.3 No other positions
txa6204 AFLP 135.6 - 140 Sorghum - TAMU FPC 2004 - ctg1844 txa6204 AFLP 8 - 52 (bands) Marker Identity View Maps
txa383 AFLP 135.6 - 140 No other positions
txa6125 AFLP 149.1 - 150.3 No other positions
txa2027 AFLP 161.4 Sorghum - TAMU FPC 2004 - ctg597 txa2027 AFLP 9 - 32 (bands) Marker Identity View Maps