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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oryza sativa-Gramene IRGSP Assm 2005
(Reference Set)
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Maps Chr. 5
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Clone
EST
FPC
Genomic DNA
mRNA
RFLP
Other
 
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Features:		 No Yes
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
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Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Gramene IRGSP Assm 2005 [ View Map Set Info ]
Map Name: Chr. 5
Map Start: 0 bp
Map Stop: 30,031,585 bp
Features by Type:
9,382 Clone
4 EST
447 FPC
43 Genomic DNA
657 mRNA
468 RFLP
11,001 Total

Map Features

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Items 1 to 25 of 11,001.       of 441 | Next
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
L31941 mRNA 3,513,450 - 3,514,085 No other positions
AB026564 mRNA 5,315,908 - 5,316,011 No other positions
AB026564 mRNA 5,316,449 - 5,316,595 No other positions
AB026564 mRNA 5,317,083 - 5,317,224 No other positions
AB026564 mRNA 5,317,365 - 5,317,461 No other positions
AB026564 mRNA 5,317,572 - 5,317,641 No other positions
AB026564 mRNA 5,317,726 - 5,317,830 No other positions
AB026564 mRNA 5,317,973 - 5,318,071 No other positions
AB026564 mRNA 5,318,504 - 5,318,594 No other positions
AB026564 mRNA 5,318,680 - 5,318,926 No other positions
L28001 mRNA 15,587,348 - 15,587,821 No other positions
L28001 mRNA 15,587,986 - 15,588,065 No other positions
L28001 mRNA 15,588,143 - 15,588,202 No other positions
L28001 mRNA 15,588,289 - 15,588,382 No other positions
L28001 mRNA 15,588,459 - 15,588,593 No other positions
L28001 mRNA 15,588,773 - 15,588,828 No other positions
L28001 mRNA 15,589,531 - 15,589,632 No other positions
L28001 mRNA 15,589,716 - 15,589,823 No other positions
L28001 mRNA 15,590,378 - 15,590,455 No other positions
L28001 mRNA 15,590,604 - 15,590,693 No other positions
L28001 mRNA 15,590,775 - 15,590,812 No other positions
L28001 mRNA 15,591,062 - 15,591,134 No other positions
L28001 mRNA 15,591,233 - 15,591,400 No other positions
AB042259 mRNA 22,687,596 - 22,687,850 No other positions
AB042259 mRNA 22,687,930 - 22,688,014 No other positions