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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oryza sativa-Gramene IRGSP Assm 2005
(Reference Set)
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Maps Chr. 12
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Clone
FPC
Genomic DNA
mRNA
RFLP
Other
 
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Features:		 No Yes
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
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Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Gramene IRGSP Assm 2005 [ View Map Set Info ]
Map Name: Chr. 12
Map Start: 0 bp
Map Stop: 27,755,892 bp
Features by Type:
5,585 Clone
311 FPC
21 Genomic DNA
283 mRNA
309 RFLP
6,509 Total

Map Features

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Items 1 to 25 of 6,509.       of 261 | Next
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 12
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
AB036988 mRNA 534,941 - 536,085 No other positions
AB036988 mRNA 536,226 - 536,439 No other positions
AB036988 mRNA 538,601 - 538,860 No other positions
AB036988 mRNA 539,201 - 539,324 No other positions
AF151693 mRNA 5,584,259 - 5,584,301 No other positions
AF151693 mRNA 5,585,209 - 5,585,409 No other positions
AF151693 mRNA 5,586,995 - 5,587,079 No other positions
AF151693 mRNA 5,587,719 - 5,587,783 No other positions
AF151693 mRNA 5,587,940 - 5,588,039 No other positions
AF151693 mRNA 5,588,262 - 5,588,303 No other positions
AF151693 mRNA 5,588,453 - 5,588,494 No other positions
AF151693 mRNA 5,588,712 - 5,589,327 No other positions
AY838898 mRNA 14,381,036 - 14,382,965 No other positions
AY838901 mRNA 26,494,677 - 26,496,717 No other positions
AF159883 mRNA 2,564,263 - 2,564,758 Oryza sativa - JRGP RFLP 2000 - 12 Rcn3 Gene 10.8 - 26 (cM) ISS View Maps
AF159883 mRNA 2,564,847 - 2,564,887 Oryza sativa - JRGP RFLP 2000 - 12 Rcn3 Gene 10.8 - 26 (cM) ISS View Maps
AF159883 mRNA 2,565,138 - 2,565,199 Oryza sativa - JRGP RFLP 2000 - 12 Rcn3 Gene 10.8 - 26 (cM) ISS View Maps
AF159883 mRNA 2,565,305 - 2,565,612 Oryza sativa - JRGP RFLP 2000 - 12 Rcn3 Gene 10.8 - 26 (cM) ISS View Maps
AY652589 mRNA 23,673,633 - 23,674,067 No other positions
AY652589 mRNA 23,674,162 - 23,674,278 No other positions
AY652589 mRNA 23,676,764 - 23,677,089 No other positions
AY652589 mRNA 23,671,988 - 23,673,537 No other positions
AB180961 mRNA 1,042,559 - 1,044,255 No other positions
AB180961 mRNA 1,045,368 - 1,046,052 No other positions
AY496951 mRNA 19,058,029 - 19,058,870 No other positions