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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oryza sativa-Morph 2000
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oryza sativa - Hokkaido Morphological 2000 [ View Map Set Info ]
Map Name: 1
Map Start: 0 cM
Map Stop: 149 cM
Features by Type:
49 Gene
49 Total

Map Features

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Items 1 to 25 of 49.       of 2 | Next
Oryza sativa - Hokkaido Morphological 2000 - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Rd Gene 65 No other positions
sd1 Gene 73 Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 CQAI3 QTL 129.1 - 150.1 (cM) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA003-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 AY114310 mRNA 69,376,772 - 69,378,852 () ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQAI6-PTHT QTL 34,937,981 - 40,567,354 (bp) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA007-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AF465256 Genomic DNA 40,135,884 - 40,138,608 (bp) ISS View Maps
Oryza sativa - KRGRP 1998 - 1 sd1 Gene 190.1 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA009-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQAI1-PTHT QTL 34,937,981 - 40,567,354 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA006 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA010 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 3 U50333 mRNA 36,143,683 - 36,145,281 (bp) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA004-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 CQAI1 QTL 129.1 - 150.1 (cM) ISS View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 AB077025 mRNA 55,257,937 - 55,261,213 () ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA010-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA008-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AB077025 mRNA 40,138,313 - 40,138,869 (bp) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA005-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 AY114310 mRNA 55,257,937 - 55,261,213 () ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AF465256 Genomic DNA 40,138,992 - 40,142,473 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA004 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AY114310 mRNA 40,138,313 - 40,138,869 (bp) ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AY114310 mRNA 40,138,972 - 40,139,293 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA012 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 CQAI3-PTHT QTL 34,937,981 - 40,567,354 (bp) ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AY114310 mRNA 40,140,765 - 40,141,055 (bp) ISS View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 1 sd1 Gene 103.5 - 104.1 (cM) Marker Identity View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AB077025 mRNA 40,138,972 - 40,139,293 (bp) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AY114310 mRNA 38,381,423 - 38,384,165 (bp) ISS View Maps
Oryza sativa - KRGRP Mil23/Gih QTL 1998 - 1 sd1 Gene 190.1 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA006-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA003 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA013-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA002 QTL 129.1 - 151.3 (cM) ISS View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 U50333 mRNA 69,377,032 - 69,378,828 () ISS View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 2 U50333 mRNA 55,257,666 - 55,260,523 () ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA013 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa - JRGP RFLP 2000 - 1 sd1 Gene 149.1 - 151 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AB077025 mRNA 38,381,423 - 38,384,165 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA009 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA001 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AB077025 mRNA 40,140,765 - 40,141,055 (bp) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA002-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA011 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 sd1 Gene 38,381,339 - 38,384,461 (bp) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 LOC_Os01g66100 Gene Prediction 38,381,339 - 38,384,461 (bp) ISS, IAGP View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 1 U50333 mRNA 462,534 - 463,603 () ISS View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 3 AB077025 mRNA 69,376,772 - 69,378,852 () ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA011-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 1 AF465255 Genomic DNA 40,135,884 - 40,142,473 (bp) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA008 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA005 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 CQAI6 QTL 129.1 - 150.1 (cM) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA001-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
Brachypodium distachyon - Brachypodium distachyon 1.0 - Chr. 1 U50333 mRNA 660,124 - 661,179 () ISS View Maps
Oryza sativa - IRRI IR64/Azu DH QTL 2003 - 1 AQEA007 QTL 129.1 - 151.3 (cM) ISS View Maps
Oryza sativa - Gramene IRGSP Assm 2005 - Chr. 3 U50333 mRNA 37,001,546 - 37,003,144 (bp) ISS View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 AQEA012-PTHT QTL 34,937,981 - 40,700,598 (bp) ISS View Maps
A Gene 66 No other positions
chl5 Gene 119 - 145 No other positions
chl6 Gene 84 No other positions
d26 Gene 29 - 103 No other positions
d18 Gene 18 Oryza sativa - JRGP RFLP 2000 - 1 d18 Gene 21.6 - 29.2 (cM) Marker Identity View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 1 d18 Gene 18.1 - 25.7 (cM) Marker Identity View Maps
fs2 Gene 0 Oryza sativa - JRGP RFLP 2000 - 1 fs2 Gene 0 - 15.1 (cM) Marker Identity View Maps
Pau Gene 26 No other positions
Pn Gene 35 No other positions
Prp1 Gene 58.8 - 73.2 No other positions
Shp1 Gene 63 No other positions
d10 Gene 96 Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 1 d10 Gene 92.55 - 135.5 (cM) Marker Identity View Maps
eg1 Gene 132 Oryza sativa - JRGP RFLP 2000 - 1 eg1 Gene 156.8 - 158.4 (cM) Marker Identity View Maps
gf2 Gene 51 - 93 Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 1 gf2 Gene 97.3 (cM) Marker Identity View Maps
cul11 Gene 45 Oryza sativa - JRGP RFLP 2000 - 1 cul11 Gene 78 - 96.8 (cM) Marker Identity View Maps
v6 Gene 149 No other positions
z8 Gene 72 No other positions
shl2 Gene 62 - 84 No other positions
al4 Gene 106 No other positions
al8 Gene 7 - 29 Oryza sativa - JRGP RFLP 2000 - 1 al8 Gene 10.6 - 40.2 (cM) Marker Identity View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 1 al8 Gene 7.1 - 36.7 (cM) Marker Identity View Maps
lrd12 Gene 125 No other positions
Est15 Gene 72 Oryza sativa - KRGRP 1998 - 1 Est15 Gene 195.4 (cM) Marker Identity View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 1 Est15 Gene 102.6 - 105 (cM) Marker Identity View Maps
shr1 Gene 64 No other positions
d55 Gene 117 - 147 No other positions