Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history
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Gramene is produced in collaboration with Ensembl Plants

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Gene: Xa21* Os11g0559200

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Location

Chromosome 11: 20,802,978-20,806,262 forward strand.

About this gene

This gene has 1 transcript (splice variant), 50 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Os11t0559200-00	2997	998aa	Os11t0559200-00	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3CCD5 O24435 Q2R2K5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Literature

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Showing the top 11 hits from Europe PubMed Central

PubMed ID	Title	Authors	Journal
25016378	Genetic diversity of the conserved motifs of six bacterial leaf blight resistance genes in a set of rice landraces.	Das B, Sengupta S, Prasad M, Ghose TK.	BMC Genet 15 2014
25491793	Genetic diversity analysis in a set of Caricaceae accessions using resistance gene analogues.	Sengupta S, Das B, Acharyya P, Prasad M, Ghose TK.	BMC Genet 15 2014
31321562	Whole-Genome Sequencing Identifies a Rice Grain Shape Mutant, gs9-1.	Jiang L, Li G, Chern M, Jain R, Pham NT, Martin JA, Schackwitz WS, Zhao J, Ruan D, Huang R, Zheng J, Ronald PC.	Rice (N Y) 12 (1) 2019
26690414	De Novo Transcriptome Sequencing of Oryza officinalis Wall ex Watt to Identify Disease-Resistance Genes.	He B, Gu Y, Tao X, Cheng X, Wei C, Fu J, Cheng Z, Zhang Y.	Int J Mol Sci 16 (12) 2015
26609518	Identification of Immune Related LRR-Containing Genes in Maize (Zea mays L.) by Genome-Wide Sequence Analysis.	Song W, Wang B, Li X, Wei J, Chen L, Zhang D, Zhang W, Li R.	Int J Genomics 2015 2015
34721467	Toward Integrated Multi-Omics Intervention: Rice Trait Improvement and Stress Management.	Iqbal Z, Iqbal MS, Khan MIR, Ansari MI.	Front Plant Sci 12 2021
28742872	The wheat WRKY transcription factors TaWRKY49 and TaWRKY62 confer differential high-temperature seedling-plant resistance to Puccinia striiformis f. sp. tritici.	Wang J, Tao F, Tian W, Guo Z, Chen X, Xu X, Shang H, Hu X.	PLoS One 12 (7) 2017
26640944	Transcriptomic Analysis and the Expression of Disease-Resistant Genes in Oryza meyeriana under Native Condition.	He B, Tao X, Gu Y, Wei C, Cheng X, Xiao S, Cheng Z, Zhang Y.	PLoS One 10 (12) 2015
24371834	Gene prioritization of resistant rice gene against Xanthomas oryzae pv. oryzae by using text mining technologies.	Xia J, Zhang X, Yuan D, Chen L, Webster J, Fang AC.	Biomed Res Int 2013 2013
23573899	Novel receptor-like kinases in cacao contain PR-1 extracellular domains.	Teixeira PJ, Costa GG, Fiorin GL, Pereira GA, Mondego JM.	Mol Plant Pathol 14 (6) 2013
19906694	PRGdb: a bioinformatics platform for plant resistance gene analysis.	Sanseverino W, Roma G, De Simone M, Faino L, Melito S, Stupka E, Frusciante L, Ercolano MR.	Nucleic Acids Res 38 (database issue) 2010

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