Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history
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Gramene is produced in collaboration with Ensembl Plants

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Gene: PHYB AT2G18790

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Description

phytochrome B [Source:NCBI gene (formerly Entrezgene);Acc:816394]

Gene Synonyms

HY3, MSF3.17, MSF3_17, OOP1, OUT OF PHASE 1, PHYTOCHROME B

Location

Chromosome 2: 8,139,756-8,144,461 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 170 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PHYB-202	AT2G18790.1	4145	1172aa	AT2G18790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W0V4 P14713	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PHYB-201	AT2G18790.2	4497	1130aa	AT2G18790.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VXX1 A0A384KZ81	-	-

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree

Orthologues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data