Arabidopsis thaliana (TAIR10)
Description

Homeodomain-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827904]

Gene Synonyms

luminidependens, T10P11.15, T10P11_15

Location
About this gene

This gene has 2 transcripts (splice variants) and 128 orthologues.

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
LD-201AT4G02560.13281953aaAT4G02560.1
 
Protein coding
Q38796 -Ensembl Canonical
LD-202AT4G02560.23123953aaAT4G02560.2
 
Protein coding
Q38796 --

Showing the top 50 hits from Europe PubMed Central

PubMed IDTitleAuthorsJournal
38346986Chromatin attachment to the nuclear matrix represses hypocotyl elongation in Arabidopsis thaliana.Xu L, Zheng S, Witzel K, Van De Slijke E, Baekelandt A, Mylle E, Van Damme D, Cheng J, De Jaeger G, Inzé D, Jiang H.Nat Commun 15 (1) 2024
PPR798200Transgenerational effects of chromium stress at phenotypic and molecular level in Arabidopsis thalianaColzi I, Gonnelli C, Vergata C, Coppi A, Castellani MB, Golia G, Giovino A, Buti M, Sabato T, Capuana M, Aprile A, Bellis LD, Cicatelli A, Guarino F, Castiglione S, Fotopoulos V, Ioannou A, Martinelli F.preprint (2024)
38460112Genome-wide association analysis reveals genes controlling an antagonistic effect of biotic and osmotic stress on Arabidopsis thaliana growth.Huang P, El-Soda M, Wolinska KW, Zhao K, Davila Olivas NH, van Loon JJA, Dicke M, Aarts MGM.Mol Plant Pathol 25 (3) 2024
38153761Detailing Early Shoot Growth Arrest in Kro-0 x BG-5 Hybrids of Arabidopsis thaliana.Sageman-Furnas K, Duarte GT, Laitinen RAE.Plant Cell Physiol 65 (3) 2024
37802986The pan-genome and local adaptation of Arabidopsis thaliana.Kang M, Wu H, Liu H, Liu W, Zhu M, Han Y, Liu W, Chen C, Song Y, Tan L, Yin K, Zhao Y, Yan Z, Lou S, Zan Y, Liu J.Nat Commun 14 (1) 2023
38279311APRF1 Interactome Reveals HSP90 as a New Player in the Complex That Epigenetically Regulates Flowering Time in Arabidopsis thaliana.Isaioglou I, Podia V, Velentzas AD, Kapolas G, Beris D, Karampelias M, Plitsi PK, Chatzopoulos D, Samakovli D, Roussis A, Merzaban J, Milioni D, Stravopodis DJ, Haralampidis K.Int J Mol Sci 25 (2) 2024
38495375Lipid droplets in Arabidopsis thaliana leaves contain myosin-binding proteins and enzymes associated with furan-containing fatty acid biosynthesis.Omata Y, Sato R, Mishiro-Sato E, Kano K, Ueda H, Hara-Nishimura I, Shimada TL.Front Plant Sci 15 2024
38499552Autophagy formation, microtubule disorientation, and alteration of ATG8 and tubulin gene expression under simulated microgravity in Arabidopsis thaliana.Yemets A, Shadrina R, Blume R, Plokhovska S, Blume Y.NPJ Microgravity 10 (1) 2024
37988240Exploring Pseudomonas syringae pv. tomato biofilm-like aggregate formation in susceptible and PTI-responding Arabidopsis thaliana.Xiao WN, Nunn GM, Fufeng AB, Belu N, Brookman RK, Halim A, Krysmanski EC, Cameron RK.Mol Plant Pathol 25 (1) 2024
37372341Genetic Mapping of Genotype-by-Ploidy Effects in Arabidopsis thaliana.Wijnen CL, Becker FFM, Okkersen AA, de Snoo CB, Boer MP, van Eeuwijk FA, Wijnker E, Keurentjes JJB.Genes (Basel) 14 (6) 2023
PPR748509A fully sequenced collection of homozygous EMS mutants for forward and reverse genetic screens inArabidopsis thalianaCarrère S, Routaboul J, Savourat P, Bellenot C, López H, Monnens TQ, Ricou A, Camilleri C, Laufs P, Mercier R, Noël LD.preprint (2023)
37470457Arabidopsis thaliana Early Foliar Proteome Response to Root Exposure to the Rhizobacterium Pseudomonas simiae WCS417.Marzorati F, Rossi R, Bernardo L, Mauri P, Silvestre DD, Lauber E, Noël LD, Murgia I, Morandini P.Mol Plant Microbe Interact 36 (11) 2023
37467473Long noncoding RNAs contribute to DNA damage resistance in Arabidopsis thaliana.Durut N, Kornienko AE, Schmidt HA, Lettner N, Donà M, Nordborg M, Mittelsten Scheid O.Genetics 225 (1) 2023
37968984The Ralstonia pseudosolanacearum Type III Effector RipL Delays Flowering and Promotes Susceptibility to Pseudomonas syringae in Arabidopsis thaliana.Kim W, Jeon H, Lee H, Sohn KH, Segonzac C.Mol Cells 46 (11) 2023
37836248Regulation of Flowering Time and Other Developmental Plasticities by 3' Splicing Factor-Mediated Alternative Splicing in Arabidopsis thaliana.Lee KC, Kim YC, Kim JK, Lee H, Lee JH.Plants (Basel) 12 (19) 2023
37220420Metabolome plasticity in 241 Arabidopsis thaliana accessions reveals evolutionary cold adaptation processes.Weiszmann J, Walther D, Clauw P, Back G, Gunis J, Reichardt I, Koemeda S, Jez J, Nordborg M, Schwarzerova J, Pierides I, Nägele T, Weckwerth W.Plant Physiol 193 (2) 2023
37077703Heritability of temperature-mediated flower size plasticity in Arabidopsis thaliana.Andreou GM, Messer M, Tong H, Nikoloski Z, Laitinen RAE.Quant Plant Biol 4 2023
37141384On the causes of gene-body methylation variation in Arabidopsis thaliana.Pisupati R, Nizhynska V, Mollá Morales A, Nordborg M.PLoS Genet 19 (5) 2023
38279327Phosphorylation of Thr-225 and Ser-262 on ERD7 Promotes Age-Dependent and Stress-Induced Leaf Senescence through the Regulation of Hydrogen Peroxide Accumulation in Arabidopsis thaliana.Wu R, Pan X, Li W, Zhang Z, Guo Y.Int J Mol Sci 25 (2) 2024
37432651From root to shoot: quantifying nematode tolerance in Arabidopsis thaliana by high-throughput phenotyping of plant development.Willig JJ, Sonneveld D, van Steenbrugge JJM, Deurhof L, van Schaik CC, Teklu MG, Goverse A, Lozano-Torres JL, Smant G, Sterken MG.J Exp Bot 74 (18) 2023
37171544Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana.Manrique S, Caselli F, Matías-Hernández L, Franks RG, Colombo L, Gregis V.Plant Mol Biol 112 (3) 2023
37667232Pervasive under-dominance in gene expression underlying emergent growth trajectories in Arabidopsis thaliana hybrids.Yuan W, Beitel F, Srikant T, Bezrukov I, Schäfer S, Kraft R, Weigel D.Genome Biol 24 (1) 2023
36303325AGO1 and HSP90 buffer different genetic variants in Arabidopsis thaliana.Lemus T, Mason GA, Bubb KL, Alexandre CM, Queitsch C, Cuperus JT.Genetics 223 (2) 2023
37565540Histone Deacetylase Complex 1 and histone 1 epigenetically moderate stress responsiveness of Arabidopsis thaliana seedlings.Perrella G, Fasano C, Donald NA, Daddiego L, Fang W, Martignago D, Carr C, Conti L, Herzyk P, Amtmann A.New Phytol 241 (1) 2024
36634678Reproductive competence is regulated independently of vegetative phase change in Arabidopsis thaliana.Zhao J, Doody E, Poethig RS.Curr Biol 33 (3) 2023
PPR633693Long non-coding RNAs contribute to DNA damage resistance inArabidopsis thalianaDurut N, Kornienko AE, Schmidt HA, Lettner N, Donà M, Nordborg M, Scheid OM.preprint (2023)
37021425TOR acts as a metabolic gatekeeper for auxin-dependent lateral root initiation in Arabidopsis thaliana.Stitz M, Kuster D, Reinert M, Schepetilnikov M, Berthet B, Reyes-Hernández J, Janocha D, Artins A, Boix M, Henriques R, Pfeiffer A, Lohmann J, Gaquerel E, Maizel A.EMBO J 42 (10) 2023
36369052Photolysis of caged cytokinin in single cells of Arabidopsis thaliana.Dow L, Barrow RA, White RG, Mathesius U.Plant Methods 18 (1) 2022
36968378GIGANTEA supresses wilt disease resistance by down-regulating the jasmonate signaling in Arabidopsis thaliana.Patnaik A, Kumar A, Behera A, Mishra G, Dehery SK, Panigrahy M, Das AB, Panigrahi KCS.Front Plant Sci 14 2023
36576197Identification of subfunctionalized aggregate-remodeling J-domain proteins in Arabidopsis thaliana.Tak Y, Lal SS, Gopan S, Balakrishnan M, Satheesh G, Biswal AK, Verma AK, Cole SJ, Brown RE, Hayward RE, Hines JK, Sahi C.J Exp Bot 74 (5) 2023
35822517GIGANTEA regulates lateral root formation by modulating auxin signaling in Arabidopsis thaliana.Singh A.Plant Signal Behav 17 (1) 2022
PPR699946A conserved graft formation process inPicea abiesandArabidopsis thalianaidentifies the PAT gene family as central regulators of wound healingFeng M, Zhang A, Nguyen V, Bisht A, Almqvist C, Veylder LD, Carlsbecker A, Melnyk CW.preprint (2023)
36304197Epigenetic regulation of thermomorphogenesis in Arabidopsis thaliana.Hou Y, Yan Y, Cao X.aBIOTECH 3 (1) 2022
37176133The Transcription Factors WRKY41 and WRKY53 Mediate Early Flowering Induced by the Novel Plant Growth Regulator Guvermectin in Arabidopsis thaliana.Yang C, Liu C, Li S, Zhang Y, Zhang Y, Wang X, Xiang W.Int J Mol Sci 24 (9) 2023
36869652Hello darkness, my old friend: 3-KETOACYL-COENZYME A SYNTHASE4 is a branch point in the regulation of triacylglycerol synthesis in Arabidopsis thaliana.Luzarowska U, Ruß AK, Joubès J, Batsale M, Szymański J, P Thirumalaikumar V, Luzarowski M, Wu S, Zhu F, Endres N, Khedhayir S, Schumacher J, Jasinska W, Xu K, Correa Cordoba SM, Weil S, Skirycz A, Fernie AR, Li-Beisson Y, Fusari CM, Brotman Y.Plant Cell 35 (6) 2023
34901781Role of the RNA-directed DNA Methylation pathway in the regulation of maternal effects in Arabidopsis thaliana seed germination.Authier A, Cerdán P, Auge GA.MicroPubl Biol 2021 2021
37612770Analysis of state 1-state 2 transitions by genome editing and complementation reveals a quenching component independent from the formation of PSI-LHCI-LHCII supercomplex in Arabidopsis thaliana.Cutolo EA, Caferri R, Guardini Z, Dall'Osto L, Bassi R.Biol Direct 18 (1) 2023
37111875SDG26 Is Involved in Trichome Control in Arabidopsis thaliana: Affecting Phytohormones and Adjusting Accumulation of H3K27me3 on Genes Related to Trichome Growth and Development.Zeng J, Yang L, Tian M, Xie X, Liu C, Ruan Y.Plants (Basel) 12 (8) 2023
35916255Characteristics analysis of Early Responsive to Dehydration genes in Arabidopsis thaliana (AtERD).Wu G, Tian N, She F, Cao A, Wu W, Zheng S, Yang N.Plant Signal Behav 18 (1) 2023
36110360Dynamic changes in the transcriptome landscape of Arabidopsis thaliana in response to cold stress.Liu Y, Cai Y, Li Y, Zhang X, Shi N, Zhao J, Yang H.Front Plant Sci 13 2022
36433704A genome-wide association study identifies novel players in Na and Fe homeostasis in Arabidopsis thaliana under alkaline-salinity stress.Almira Casellas MJ, Pérez-Martín L, Busoms S, Boesten R, Llugany M, Aarts MGM, Poschenrieder C.Plant J 113 (2) 2023
36679059Brassica napus Transcription Factor Bna.A07.WRKY70 Negatively Regulates Leaf Senescence in Arabidopsis thaliana.Liu T, Li Y, Wang C, Zhang D, Liu J, He M, Chen M, Guo Y.Plants (Basel) 12 (2) 2023
36301462CRISPR/Cas9-mediated AtGATA25 mutant represents a novel model for regulating hypocotyl elongation in Arabidopsis thaliana.Kim K, Shin J, Kang TA, Kim B, Kim WC.Mol Biol Rep 50 (1) 2023
36432872Arabidopsis thaliana Accessions from the Chernobyl Exclusion Zone Show Decreased Sensitivity to Additional Acute Irradiation.Podlutskii M, Babina D, Podobed M, Bondarenko E, Bitarishvili S, Blinova Y, Shesterikova E, Prazyan A, Turchin L, Garbaruk D, Kudin M, Duarte GT, Volkova P.Plants (Basel) 11 (22) 2022
36466292Genome-wide characterization of PEBP gene family in Perilla frutescens and PfFT1 promotes flowering time in Arabidopsis thaliana.Xu H, Guo X, Hao Y, Lu G, Li D, Lu J, Zhang T.Front Plant Sci 13 2022
37915512SEGS-1 a cassava genomic sequence increases the severity of African cassava mosaic virus infection in Arabidopsis thaliana.Rajabu CA, Dallas MM, Chiunga E, De León L, Ateka EM, Tairo F, Ndunguru J, Ascencio-Ibanez JT, Hanley-Bowdoin L.Front Plant Sci 14 2023
35502761The genetic basis of natural variation in the timing of vegetative phase change in Arabidopsis thaliana.Doody E, Zha Y, He J, Poethig RS.Development 149 (10) 2022
37108801Expression of the Populus Orthologues of AtYY1, YIN and YANG Activates the Floral Identity Genes AGAMOUS and SEPALLATA3 Accelerating Floral Transition in Arabidopsis thaliana.Liu X, Xing Q, Liu X, Müller-Xing R.Int J Mol Sci 24 (8) 2023
36049521Structural and functional studies of Arabidopsis thaliana triphosphate tunnel metalloenzymes reveal roles for additional domains.Pesquera M, Martinez J, Maillot B, Wang K, Hofmann M, Raia P, Loubéry S, Steensma P, Hothorn M, Fitzpatrick TB.J Biol Chem 298 (11) 2022
38074475Elucidating the Temporal Patterns of Gene Expression in the Inferred Regulatory Interactions of GmCOL1b in Glycine max.Alcantara M, Iftikhar H, Dzheyranyan D, Kagan K, Abbasi P, Alamilla A, Ayala N, Baca T, Benoit V, Clausen N, Coto C, Guerrero C, Hernandez Catalan E, Hurtado S, Lopez A, Lopez J, Majarian N, Mesfin N, Mishegyan A, Mkrtchyan G, Ordonez A, Pachanyan A, Pelayo T, Rosas A, Rowsey K, Sharma E, Sharma S, Van Grinsven S, Hanzawa Y.MicroPubl Biol 2023 2023