Arabidopsis thaliana (TAIR10) ▼ 
Summary
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circadian clock associated 1 [Source:NCBI gene (formerly Entrezgene);Acc:819296]
AtCCA1, circadian clock associated 1, F19D11.11, MYB-RELATED DNA BINDING PROTEIN
Chromosome 2: 19,245,591-19,248,915 forward strand.
This gene has 3 transcripts (splice variants), 142 orthologues and 1 paralogue.
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Showing the top 50 hits from Europe PubMed Central
| PubMed ID | Title | Authors | Journal |
|---|---|---|---|
| PMC10671209 | Characteristics and Functions of MYB (v-Myb avivan myoblastsis virus oncogene homolog)-Related Genes in Arabidopsis thaliana | Genes (Basel) 14 (11) 2023 | |
| PMC10671646 | The Homeodomain–Leucine Zipper Subfamily I Contributes to Leaf Age- and Time-Dependent Resistance to Pathogens in Arabidopsis thaliana | Int J Mol Sci 24 (22) 2023 | |
| 37836248 | Regulation of Flowering Time and Other Developmental Plasticities by 3' Splicing Factor-Mediated Alternative Splicing in Arabidopsis thaliana. | Lee KC, Kim YC, Kim JK, Lee H, Lee JH. | Plants (Basel) 12 (19) 2023 |
| 37511083 | Comparative Transcriptomics of Multi-Stress Responses in Pachycladon cheesemanii and Arabidopsis thaliana. | Dong Y, Gupta S, Wargent JJ, Putterill J, Macknight RC, Gechev TS, Mueller-Roeber B, Dijkwel PP. | Int J Mol Sci 24 (14) 2023 |
| PPR599763 | CONSTANS alters the circadian clock inArabidopsis thaliana | de los Reyes P, Romero-Campero FJ, Gao H, Serrano-Bueno G, Romero JM, Valverde F. | preprint (2023) |
| 37091499 | Regulatory networks of hormone-involved transcription factors and their downstream pathways during somatic embryogenesis of Arabidopsis thaliana. | Khadem A, Moshtaghi N, Bagheri A. | 3 Biotech 13 (5) 2023 |
| 35822517 | GIGANTEA regulates lateral root formation by modulating auxin signaling in Arabidopsis thaliana. | Singh A. | Plant Signal Behav 17 (1) 2022 |
| 36695935 | Pseudomonas fluorescens imparts cadmium stress tolerance in Arabidopsis thaliana via induction of AtPCR2 gene expression. | Reddy CS, Cho M, Kaul T, Joeng JT, Kim KM. | J Genet Eng Biotechnol 21 (1) 2023 |
| 36982335 | Overexpression of a Fragaria vesca 1R-MYB Transcription Factor Gene (FvMYB114) Increases Salt and Cold Tolerance in Arabidopsis thaliana. | Li W, Li P, Chen H, Zhong J, Liang X, Wei Y, Zhang L, Wang H, Han D. | Int J Mol Sci 24 (6) 2023 |
| 35646013 | Photoperiod Stress in Arabidopsis thaliana Induces a Transcriptional Response Resembling That of Pathogen Infection. | Cortleven A, Roeber VM, Frank M, Bertels J, Lortzing V, Beemster GTS, Schmülling T. | Front Plant Sci 13 2022 |
| 38074475 | Elucidating the Temporal Patterns of Gene Expression in the Inferred Regulatory Interactions of GmCOL1b in Glycine max. | Alcantara M, Iftikhar H, Dzheyranyan D, Kagan K, Abbasi P, Alamilla A, Ayala N, Baca T, Benoit V, Clausen N, Coto C, Guerrero C, Hernandez Catalan E, Hurtado S, Lopez A, Lopez J, Majarian N, Mesfin N, Mishegyan A, Mkrtchyan G, Ordonez A, Pachanyan A, Pelayo T, Rosas A, Rowsey K, Sharma E, Sharma S, Van Grinsven S, Hanzawa Y. | MicroPubl Biol 2023 2023 |
| 36301462 | CRISPR/Cas9-mediated AtGATA25 mutant represents a novel model for regulating hypocotyl elongation in Arabidopsis thaliana. | Kim K, Shin J, Kang TA, Kim B, Kim WC. | Mol Biol Rep 50 (1) 2023 |
| 37908495 | Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 ). | Alcantara M, Iftikhar H, Kagan K, Dzheyranyan D, Abbasi P, Alamilla A, Ayala N, Baca T, Benoit V, Clausen N, Coto C, Guerrero C, Hernandez Catalan E, Hurtado S, Lopez A, Lopez J, Majarian N, Mesfin N, Mishegyan A, Mkrtchyan G, Ordonez A, Pachanyan A, Pelayo T, Rosas A, Rowsey K, Sharma E, Sharma S, Van Grinsven S, Hanzawa Y. | MicroPubl Biol 2023 2023 |
| 36257367 | Genome-wide analysis of long non-coding RNAs under diel light exhibits role in floral development and the circadian clock in Arabidopsis thaliana. | Yadav VK, Sawant SV, Yadav A, Jalmi SK, Kerkar S. | Int J Biol Macromol 223 (pt b) 2022 |
| 34733306 | Arabidopsis thaliana PRR7 Provides Circadian Input to the CCA1 Promoter in Shoots but not Roots. | Nimmo HG, Laird J. | Front Plant Sci 12 2021 |
| 35109794 | SPL9 mediates freezing tolerance by directly regulating the expression of CBF2 in Arabidopsis thaliana. | Zhao J, Shi M, Yu J, Guo C. | BMC Plant Biol 22 (1) 2022 |
| 34740825 | The Circadian Clock Gene Circuit Controls Protein and Phosphoprotein Rhythms in Arabidopsis thaliana. | Krahmer J, Hindle M, Perby LK, Mogensen HK, Nielsen TH, Halliday KJ, van Ooijen G, Le Bihan T, Millar AJ. | Mol Cell Proteomics 21 (1) 2022 |
| 34622177 | Erratum: Brassinosteroids Regulate Circadian Oscillation via the BES1/TPL-CCA1/LHY Module in Arabidopsis thaliana. | Lee HG, Won JH, Choi YR, Lee K, Seo PJ. | iScience 24 (10) 2021 |
| 33958633 | ATHB2 is a negative regulator of germination in Arabidopsis thaliana seeds. | Tognacca RS, Carabelli M, Morelli G, Ruberti I, Botto JF. | Sci Rep 11 (1) 2021 |
| 34071961 | Beyond the Genetic Pathways, Flowering Regulation Complexity in Arabidopsis thaliana. | Quiroz S, Yustis JC, Chávez-Hernández EC, Martínez T, Sanchez MP, Garay-Arroyo A, Álvarez-Buylla ER, García-Ponce B. | Int J Mol Sci 22 (11) 2021 |
| 33822207 | Circadian Clock in Arabidopsis thaliana Determines Flower Opening Time Early in the Morning and Dominantly Closes Early in the Afternoon. | Muroya M, Oshima H, Kobayashi S, Miura A, Miyamura Y, Shiota H, Onai K, Ishiura M, Manabe K, Kutsuna S. | Plant Cell Physiol 62 (5) 2021 |
| 34381973 | Arabidopsis Coexpression Tool: a tool for gene coexpression analysis in Arabidopsis thaliana. | Zogopoulos VL, Saxami G, Malatras A, Angelopoulou A, Jen CH, Duddy WJ, Daras G, Hatzopoulos P, Westhead DR, Michalopoulos I. | iScience 24 (8) 2021 |
| 35263337 | The nitrate-inducible NAC transcription factor NAC056 controls nitrate assimilation and promotes lateral root growth in Arabidopsis thaliana. | Xu P, Ma W, Hu J, Cai W. | PLoS Genet 18 (3) 2022 |
| 35216041 | Ectopic Expression of JcCPL1, 2, and 4 Affects Epidermal Cell Differentiation, Anthocyanin Biosynthesis and Leaf Senescence in Arabidopsis thaliana. | Chen Y, Wu P, Zhang C, Guo Y, Liao B, Chen Y, Li M, Wu G, Wang Y, Jiang H. | Int J Mol Sci 23 (4) 2022 |
| 34177318 | Identification of genes involved in Meloidogyne incognita-induced gall formation processes in Arabidopsis thaliana. | Suzuki R, Ueda T, Wada T, Ito M, Ishida T, Sawa S. | Plant Biotechnol (Tokyo) 38 (1) 2021 |
| 38319968 | The interplay between the circadian clock and abiotic stress responses mediated by ABF3 and CCA1/LHY. | Liang T, Yu S, Pan Y, Wang J, Kay SA. | Proc Natl Acad Sci U S A 121 (7) 2024 |
| 38163634 | Salicylic acid in plant immunity and beyond. | Spoel SH, Dong X. | Plant Cell 36 (5) 2024 |
| PPR829848 | Synchronization of Circadian Clock Gene Expression inArabidopsisandHyaloperonospora arabidopsidisand its Impact on Host-Pathogen Interactions | Telli O, Göl D, Jin W, Cevher-Keskin B, Hong Y, McDowell JM, Studholme DJ, Tör M. | preprint (2024) |
| 34489986 | Characterization of Arabidopsis thaliana R2R3 S23 MYB Transcription Factors as Novel Targets of the Ubiquitin Proteasome-Pathway and Regulators of Salt Stress and Abscisic Acid Response. | Beathard C, Mooney S, Al-Saharin R, Goyer A, Hellmann H. | Front Plant Sci 12 2021 |
| 33643331 | Time Lag Between Light and Heat Diurnal Cycles Modulates CIRCADIAN CLOCK ASSOCIATION 1 Rhythm and Growth in Arabidopsis thaliana. | Masuda K, Yamada T, Kagawa Y, Fukuda H. | Front Plant Sci 11 2020 |
| 36506349 | Experimental Verification of Inferred Regulatory Interactions of EARLY FLOWERING 3 ( GmELF3-1 ) in Glycine max. | Alcantara M, Acosta P, Azatian A, Calderon C, Candray K, Castillo N, Coria-Gomez L, Duran J, Fam J, Hernandez-Segura D, Hidalgo L, Huerta C, Jordan S, Kagan K, Loya K, Martinez E, Musaev K, Navarro R, Nazarians N, Paglia R, Robles G, Simmons T, Smith S, Soudani F, Valenzuela E, Villalobos J, Iftikhar H, Hanzawa Y. | MicroPubl Biol 2022 2022 |
| 32430181 | CIRCADIAN CLOCK ASSOCIATED 1 gates morning phased auxin response in Arabidopsis thaliana. | Xue X, Sun K, Zhu Z. | Biochem Biophys Res Commun 527 (4) 2020 |
| 31717351 | Transgenerational Response to Nitrogen Deprivation in Arabidopsis thaliana. | Massaro M, De Paoli E, Tomasi N, Morgante M, Pinton R, Zanin L. | Int J Mol Sci 20 (22) 2019 |
| 37951242 | early maturity 7 promotes early flowering by controlling the light input into the circadian clock in barley. | Helmsorig G, Walla A, Rütjes T, Buchmann G, Schüller R, Hensel G, von Korff M. | Plant Physiol 194 (2) 2024 |
| 32153606 | ZmCCA1a on Chromosome 10 of Maize Delays Flowering of Arabidopsis thaliana. | Shi Y, Zhao X, Guo S, Dong S, Wen Y, Han Z, Jin W, Chen Y. | Front Plant Sci 11 2020 |
| 33802796 | The ATXN2 Orthologs CID3 and CID4, Act Redundantly to In-Fluence Developmental Pathways throughout the Life Cycle of Arabidopsis thaliana. | López-Juárez ZM, Aguilar-Henonin L, Guzmán P. | Int J Mol Sci 22 (6) 2021 |
| 37995186 | Circadian clock factors regulate the first condensation reaction of fatty acid synthesis in Arabidopsis. | Kim SC, Edgeworth KN, Nusinow DA, Wang X. | Cell Rep 42 (12) 2023 |
| 38386103 | Unlocking allelic variation in circadian clock genes to develop environmentally robust and productive crops. | Dwivedi SL, Quiroz LF, Spillane C, Wu R, Mattoo AK, Ortiz R. | Planta 259 (4) 2024 |
| 38514098 | Regulatory networks in plant responses to drought and cold stress. | Kim JS, Kidokoro S, Yamaguchi-Shinozaki K, Shinozaki K. | Plant Physiol 195 (1) 2024 |
| 38142447 | Complex epistatic interactions between ELF3, PRR9, and PRR7 regulate the circadian clock and plant physiology. | Yuan L, Avello P, Zhu Z, Lock SCL, McCarthy K, Redmond EJ, Davis AM, Song Y, Ezer D, Pitchford JW, Quint M, Xie Q, Xu X, Davis SJ, Ronald J. | Genetics 226 (3) 2024 |
| 31998554 | TRANSPARENT TESTA GLABRA 1 participates in flowering time regulation in Arabidopsis thaliana. | Paffendorf BAM, Qassrawi R, Meys AM, Trimborn L, Schrader A. | PeerJ 8 2020 |
| 31549020 | Structure-function study of a novel inhibitor of the casein kinase 1 family in Arabidopsis thaliana. | Saito AN, Matsuo H, Kuwata K, Ono A, Kinoshita T, Yamaguchi J, Nakamichi N. | Plant Direct 3 (9) 2019 |
| 38053291 | Genome-wide in-locus epitope tagging of Arabidopsis proteins using prime editors. | Hong C, Han JH, Hwang GH, Bae S, Seo PJ. | BMB Rep 57 (1) 2024 |
| 38428303 | Soybean RVE8a confers salt and drought tolerance in Arabidopsis. | Bao G, Sun G, Wang J, Shi T, Xu X, Zhai L, Bian S, Li X. | Biochem Biophys Res Commun 704 2024 |
| 31632417 | Genome-Wide Identification of Splicing Quantitative Trait Loci (sQTLs) in Diverse Ecotypes of Arabidopsis thaliana. | Khokhar W, Hassan MA, Reddy ASN, Chaudhary S, Jabre I, Byrne LJ, Syed NH. | Front Plant Sci 10 2019 |
| 31052578 | Physiological and Genetic Dissection of Sucrose Inputs to the Arabidopsis thaliana Circadian System. | Philippou K, Ronald J, Sánchez-Villarreal A, Davis AM, Davis SJ. | Genes (Basel) 10 (5) 2019 |
| 38255990 | The Roles of Circadian Clock Genes in Plant Temperature Stress Responses. | Jang J, Lee S, Kim JI, Lee S, Kim JA. | Int J Mol Sci 25 (2) 2024 |
| 37555432 | Compartmentation of photosynthesis gene expression in C4 maize depends on time of day. | Borba AR, Reyna-Llorens I, Dickinson PJ, Steed G, Gouveia P, Górska AM, Gomes C, Kromdijk J, Webb AAR, Saibo NJM, Hibberd JM. | Plant Physiol 193 (4) 2023 |
| 38267085 | Diurnal Rhythms in the Red Seaweed Gracilariopsis chorda are Characterized by Unique Regulatory Networks of Carbon Metabolism. | Lee J, Yang JH, Weber APM, Bhattacharya D, Kim WY, Yoon HS. | Mol Biol Evol 41 (2) 2024 |
| PPR840917 | GIGANTEAis required for circadian rhythms in wheat | Taylor LJ, Steed G, Pingarron-Cardenas G, Wittern L, Hannah MA, Webb AAR. | preprint (2024) |
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