Arabidopsis thaliana (TAIR10) ▼ 
Summary
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Homeodomain-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:839341]
LATE ELONGATED HYPOCOTYL, LATE ELONGATED HYPOCOTYL 1, LHY1, T25K16.6, T25K16_6
Chromosome 1: 33,365-37,871 reverse strand.
This gene has 8 transcripts (splice variants), 153 orthologues and 1 paralogue.
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Showing the top 50 hits from Europe PubMed Central
| PubMed ID | Title | Authors | Journal |
|---|---|---|---|
| PMC10671209 | Characteristics and Functions of MYB (v-Myb avivan myoblastsis virus oncogene homolog)-Related Genes in Arabidopsis thaliana | Genes (Basel) 14 (11) 2023 | |
| 37511083 | Comparative Transcriptomics of Multi-Stress Responses in Pachycladon cheesemanii and Arabidopsis thaliana. | Dong Y, Gupta S, Wargent JJ, Putterill J, Macknight RC, Gechev TS, Mueller-Roeber B, Dijkwel PP. | Int J Mol Sci 24 (14) 2023 |
| PPR599763 | CONSTANS alters the circadian clock inArabidopsis thaliana | de los Reyes P, Romero-Campero FJ, Gao H, Serrano-Bueno G, Romero JM, Valverde F. | preprint (2023) |
| 37091499 | Regulatory networks of hormone-involved transcription factors and their downstream pathways during somatic embryogenesis of Arabidopsis thaliana. | Khadem A, Moshtaghi N, Bagheri A. | 3 Biotech 13 (5) 2023 |
| 36398989 | Molecular Mechanisms Underlying the Establishment and Maintenance of Vascular Stem Cells in Arabidopsis thaliana. | Shimadzu S, Furuya T, Kondo Y. | Plant Cell Physiol 64 (3) 2023 |
| 36303325 | AGO1 and HSP90 buffer different genetic variants in Arabidopsis thaliana. | Lemus T, Mason GA, Bubb KL, Alexandre CM, Queitsch C, Cuperus JT. | Genetics 223 (2) 2023 |
| 35822517 | GIGANTEA regulates lateral root formation by modulating auxin signaling in Arabidopsis thaliana. | Singh A. | Plant Signal Behav 17 (1) 2022 |
| 38318967 | During long days, HY5a keeps dormancy away. | Flynn N. | Plant Cell 36 (5) 2024 |
| 35646013 | Photoperiod Stress in Arabidopsis thaliana Induces a Transcriptional Response Resembling That of Pathogen Infection. | Cortleven A, Roeber VM, Frank M, Bertels J, Lortzing V, Beemster GTS, Schmülling T. | Front Plant Sci 13 2022 |
| 38074475 | Elucidating the Temporal Patterns of Gene Expression in the Inferred Regulatory Interactions of GmCOL1b in Glycine max. | Alcantara M, Iftikhar H, Dzheyranyan D, Kagan K, Abbasi P, Alamilla A, Ayala N, Baca T, Benoit V, Clausen N, Coto C, Guerrero C, Hernandez Catalan E, Hurtado S, Lopez A, Lopez J, Majarian N, Mesfin N, Mishegyan A, Mkrtchyan G, Ordonez A, Pachanyan A, Pelayo T, Rosas A, Rowsey K, Sharma E, Sharma S, Van Grinsven S, Hanzawa Y. | MicroPubl Biol 2023 2023 |
| 36301462 | CRISPR/Cas9-mediated AtGATA25 mutant represents a novel model for regulating hypocotyl elongation in Arabidopsis thaliana. | Kim K, Shin J, Kang TA, Kim B, Kim WC. | Mol Biol Rep 50 (1) 2023 |
| 37908495 | Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 ). | Alcantara M, Iftikhar H, Kagan K, Dzheyranyan D, Abbasi P, Alamilla A, Ayala N, Baca T, Benoit V, Clausen N, Coto C, Guerrero C, Hernandez Catalan E, Hurtado S, Lopez A, Lopez J, Majarian N, Mesfin N, Mishegyan A, Mkrtchyan G, Ordonez A, Pachanyan A, Pelayo T, Rosas A, Rowsey K, Sharma E, Sharma S, Van Grinsven S, Hanzawa Y. | MicroPubl Biol 2023 2023 |
| 35567106 | Stochastic Variation in DNA Methylation Modulates Nucleosome Occupancy and Alternative Splicing in Arabidopsis thaliana. | Jabre I, Chaudhary S, Wilson CM, Staiger D, Syed N. | Plants (Basel) 11 (9) 2022 |
| 35109794 | SPL9 mediates freezing tolerance by directly regulating the expression of CBF2 in Arabidopsis thaliana. | Zhao J, Shi M, Yu J, Guo C. | BMC Plant Biol 22 (1) 2022 |
| 34733306 | Arabidopsis thaliana PRR7 Provides Circadian Input to the CCA1 Promoter in Shoots but not Roots. | Nimmo HG, Laird J. | Front Plant Sci 12 2021 |
| 34622177 | Erratum: Brassinosteroids Regulate Circadian Oscillation via the BES1/TPL-CCA1/LHY Module in Arabidopsis thaliana. | Lee HG, Won JH, Choi YR, Lee K, Seo PJ. | iScience 24 (10) 2021 |
| 34381973 | Arabidopsis Coexpression Tool: a tool for gene coexpression analysis in Arabidopsis thaliana. | Zogopoulos VL, Saxami G, Malatras A, Angelopoulou A, Jen CH, Duddy WJ, Daras G, Hatzopoulos P, Westhead DR, Michalopoulos I. | iScience 24 (8) 2021 |
| 35008489 | Molecular Basis to Integrate Microgravity Signals into the Photoperiodic Flowering Pathway in Arabidopsis thaliana under Spaceflight Condition. | Xie J, Wang L, Zheng H. | Int J Mol Sci 23 (1) 2021 |
| 33958633 | ATHB2 is a negative regulator of germination in Arabidopsis thaliana seeds. | Tognacca RS, Carabelli M, Morelli G, Ruberti I, Botto JF. | Sci Rep 11 (1) 2021 |
| 34071961 | Beyond the Genetic Pathways, Flowering Regulation Complexity in Arabidopsis thaliana. | Quiroz S, Yustis JC, Chávez-Hernández EC, Martínez T, Sanchez MP, Garay-Arroyo A, Álvarez-Buylla ER, García-Ponce B. | Int J Mol Sci 22 (11) 2021 |
| 33822207 | Circadian Clock in Arabidopsis thaliana Determines Flower Opening Time Early in the Morning and Dominantly Closes Early in the Afternoon. | Muroya M, Oshima H, Kobayashi S, Miura A, Miyamura Y, Shiota H, Onai K, Ishiura M, Manabe K, Kutsuna S. | Plant Cell Physiol 62 (5) 2021 |
| 38319968 | The interplay between the circadian clock and abiotic stress responses mediated by ABF3 and CCA1/LHY. | Liang T, Yu S, Pan Y, Wang J, Kay SA. | Proc Natl Acad Sci U S A 121 (7) 2024 |
| 32412129 | Transcriptome and epigenome analyses of vernalization in Arabidopsis thaliana. | Xi Y, Park SR, Kim DH, Kim ED, Sung S. | Plant J 103 (4) 2020 |
| PPR829848 | Synchronization of Circadian Clock Gene Expression inArabidopsisandHyaloperonospora arabidopsidisand its Impact on Host-Pathogen Interactions | Telli O, Göl D, Jin W, Cevher-Keskin B, Hong Y, McDowell JM, Studholme DJ, Tör M. | preprint (2024) |
| 34489986 | Characterization of Arabidopsis thaliana R2R3 S23 MYB Transcription Factors as Novel Targets of the Ubiquitin Proteasome-Pathway and Regulators of Salt Stress and Abscisic Acid Response. | Beathard C, Mooney S, Al-Saharin R, Goyer A, Hellmann H. | Front Plant Sci 12 2021 |
| 36506349 | Experimental Verification of Inferred Regulatory Interactions of EARLY FLOWERING 3 ( GmELF3-1 ) in Glycine max. | Alcantara M, Acosta P, Azatian A, Calderon C, Candray K, Castillo N, Coria-Gomez L, Duran J, Fam J, Hernandez-Segura D, Hidalgo L, Huerta C, Jordan S, Kagan K, Loya K, Martinez E, Musaev K, Navarro R, Nazarians N, Paglia R, Robles G, Simmons T, Smith S, Soudani F, Valenzuela E, Villalobos J, Iftikhar H, Hanzawa Y. | MicroPubl Biol 2022 2022 |
| 32430181 | CIRCADIAN CLOCK ASSOCIATED 1 gates morning phased auxin response in Arabidopsis thaliana. | Xue X, Sun K, Zhu Z. | Biochem Biophys Res Commun 527 (4) 2020 |
| 33802796 | The ATXN2 Orthologs CID3 and CID4, Act Redundantly to In-Fluence Developmental Pathways throughout the Life Cycle of Arabidopsis thaliana. | López-Juárez ZM, Aguilar-Henonin L, Guzmán P. | Int J Mol Sci 22 (6) 2021 |
| 37995186 | Circadian clock factors regulate the first condensation reaction of fatty acid synthesis in Arabidopsis. | Kim SC, Edgeworth KN, Nusinow DA, Wang X. | Cell Rep 42 (12) 2023 |
| 32153606 | ZmCCA1a on Chromosome 10 of Maize Delays Flowering of Arabidopsis thaliana. | Shi Y, Zhao X, Guo S, Dong S, Wen Y, Han Z, Jin W, Chen Y. | Front Plant Sci 11 2020 |
| 38386103 | Unlocking allelic variation in circadian clock genes to develop environmentally robust and productive crops. | Dwivedi SL, Quiroz LF, Spillane C, Wu R, Mattoo AK, Ortiz R. | Planta 259 (4) 2024 |
| 38514098 | Regulatory networks in plant responses to drought and cold stress. | Kim JS, Kidokoro S, Yamaguchi-Shinozaki K, Shinozaki K. | Plant Physiol 195 (1) 2024 |
| 38413620 | Core clock genes adjust growth cessation time to day-night switches in poplar. | Alique D, Redondo López A, González Schain N, Allona I, Wabnik K, Perales M. | Nat Commun 15 (1) 2024 |
| 38142447 | Complex epistatic interactions between ELF3, PRR9, and PRR7 regulate the circadian clock and plant physiology. | Yuan L, Avello P, Zhu Z, Lock SCL, McCarthy K, Redmond EJ, Davis AM, Song Y, Ezer D, Pitchford JW, Quint M, Xie Q, Xu X, Davis SJ, Ronald J. | Genetics 226 (3) 2024 |
| 31998554 | TRANSPARENT TESTA GLABRA 1 participates in flowering time regulation in Arabidopsis thaliana. | Paffendorf BAM, Qassrawi R, Meys AM, Trimborn L, Schrader A. | PeerJ 8 2020 |
| 31632417 | Genome-Wide Identification of Splicing Quantitative Trait Loci (sQTLs) in Diverse Ecotypes of Arabidopsis thaliana. | Khokhar W, Hassan MA, Reddy ASN, Chaudhary S, Jabre I, Byrne LJ, Syed NH. | Front Plant Sci 10 2019 |
| 31052578 | Physiological and Genetic Dissection of Sucrose Inputs to the Arabidopsis thaliana Circadian System. | Philippou K, Ronald J, Sánchez-Villarreal A, Davis AM, Davis SJ. | Genes (Basel) 10 (5) 2019 |
| 38255990 | The Roles of Circadian Clock Genes in Plant Temperature Stress Responses. | Jang J, Lee S, Kim JI, Lee S, Kim JA. | Int J Mol Sci 25 (2) 2024 |
| 38267085 | Diurnal Rhythms in the Red Seaweed Gracilariopsis chorda are Characterized by Unique Regulatory Networks of Carbon Metabolism. | Lee J, Yang JH, Weber APM, Bhattacharya D, Kim WY, Yoon HS. | Mol Biol Evol 41 (2) 2024 |
| 38254983 | GIGANTEA Unveiled: Exploring Its Diverse Roles and Mechanisms. | Liu L, Xie Y, Yahaya BS, Wu F. | Genes (Basel) 15 (1) 2024 |
| 37481743 | Environmental F actors coordinate circadian clock function and rhythm to regulate plant development. | Zhang Y, Ma Y, Zhang H, Xu J, Gao X, Zhang T, Liu X, Guo L, Zhao D. | Plant Signal Behav 18 (1) 2023 |
| 38338945 | Molecular Mechanisms of Seasonal Gene Expression in Trees. | Chu X, Wang M, Fan Z, Li J, Yin H. | Int J Mol Sci 25 (3) 2024 |
| 38664694 | Circadian rhythm response and its effect on photosynthetic characteristics of the Lhcb family genes in tea plant. | Hu ZH, Zhang N, Qin ZY, Li JW, Tao JP, Yang N, Chen Y, Kong JY, Luo W, Chen X, Li XH, Xiong AS, Zhuang J. | BMC Plant Biol 24 (1) 2024 |
| PPR785078 | Identification of Arabidopsis phospholipase Ds involved in circadian clock alterations using CRISPR/Cas9-based multiplex editing | Kim S, Nusinow DA, Wang X. | preprint (2024) |
| PPR840917 | GIGANTEAis required for circadian rhythms in wheat | Taylor LJ, Steed G, Pingarron-Cardenas G, Wittern L, Hannah MA, Webb AAR. | preprint (2024) |
| 38203827 | Differential Response of MYB Transcription Factor Gene Transcripts to Circadian Rhythm in Tea Plants (Camellia sinensis). | Hu Z, Zhang N, Qin Z, Li J, Yang N, Chen Y, Kong J, Luo W, Xiong A, Zhuang J. | Int J Mol Sci 25 (1) 2024 |
| 38586380 | Photoperiodic and lighting treatments for flowering control and its genetic regulation in sugarcane breeding. | Wickramasinghe KP, Kong CY, Lin XQ, Zhao PF, Mehdi F, Li XJ, Liu XL, Mao J, Lu X. | Heliyon 10 (7) 2024 |
| 31237908 | A robust circadian rhythm of metabolites in Arabidopsis thaliana mutants with enhanced growth characteristics. | Augustijn D, de Groot HJM, Alia A. | PLoS One 14 (6) 2019 |
| 31428455 | Hierarchical graphical model reveals HFR1 bridging circadian rhythm and flower development in Arabidopsis thaliana. | Duren Z, Wang Y, Wang J, Zhao XM, Lv L, Li X, Liu J, Zhu XG, Chen L, Wang Y. | NPJ Syst Biol Appl 5 2019 |
| 31216029 | Spliceosome disassembly factors ILP1 and NTR1 promote miRNA biogenesis in Arabidopsis thaliana. | Wang J, Chen S, Jiang N, Li N, Wang X, Li Z, Li X, Liu H, Li L, Yang Y, Ni T, Yu C, Ma J, Zheng B, Ren G. | Nucleic Acids Res 47 (15) 2019 |
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