Gramene Workshop
RiceCAP, 6/8/06
Gramene Slide Show: A Database Introduction, Website Introduction and Hands-on Exercise (PDF)
The links below correspond to the numbers on the exercise, and provide quick access to the appropriate site for each.
www.gramene.org
- http://www.gramene.org/qtl/
- Search box located at top right of any web page (except for home page, where its on the left under "Quick Search."
- http://www.gramene.org/plant_ontology/
- http://www.gramene.org/db/ontology/search_term?id=TO:0000144
- Evidence Codes - http://www.gramene.org/plant_ontology/evidence_codes.html#IAGP
- http://www.gramene.org/db/qtl/qtl_display?qtl_accession_id=AQFU049
- http://www.gramene.org/db/cmap/feature?feature_acc=alg2004a-97
- http://www.gramene.org/db/markers/marker_view?marker_id=6083
- http://www.gramene.org/db/cmap/viewer?ref_map_set_acc=alg2004a&label_features=all&ref_map_accs=alg2004a11&highlight=%22AQFU049%22&data_source=Gramene
- Comparison map
- http://www.gramene.org/db/markers/marker_view?marker_id=6083
- http://www.gramene.org/Oryza_sativa/contigview?&chr=11&vc_start=28236911&vc_end=28257155
- http://www.gramene.org/db/diversity/diversity_view?action=view&object=cdv_marker&id=164&db_name=database_rice21
- Genes Database: http://www.gramene.org/db/genes/search_gene?search_field=&species=&query=wx&query_submit=Search
Pathways query results: http://pathway.gramene.org/RICE/NEW-IMAGE?type=GENE&object=LOC_OS06G04200.1