1. Genes for coloration
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Gene Character Linkage* Chro- Strain Reference
symbol group mosome (Institution)
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AS Anthocyanin activator III 3 I-33 66,157,172,
(purple apiculus in Surjamukhi(HK) 248,276,280
AE the complementary E 44
action with C and P, Pirurutong(HK)
A multiple alleles) A-58 Kokushokuto-
2
Dd A-83 Norin-
20go(HK)
Am A-43 Hokkaimochi-
Igo(HK)
A+
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Bf Brown furrows of hull Most of japonica 68.172,231
I-Bf Inhibitor for brown V 1 A-5 Akamuro(HK)
furrows
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Bh-a Black hull H-478 tester(HK) 109,144,
Bh-b (complementary genes) H-478 do. CHK) 151,170
Bh- II 11 H-478 do. (HK)
c(Ph?)
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CBs Chromogen for antho- I 6 I-33 67,157,172,
cyanin (Tawny color Surjamukhi(HK) 248,276,280
CB apiculus in the comple- A-13 Chabo(HK)
CBp mentary action with P A-1 Akage(HK)
CBt and purple apiculus A-103 Tanpaku(HK)
CBr with A and P, multiple A-5 Akamuro(HK)
CBd alleles) I-47
Dalashaita(HK)
CBk I-33 Karalath(HK)
CBc I-45 Charnock(HK)
CBm A-43 Hokkaimochi-
lgo(HK)
C+=C
Bm
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gf gold furrows of hull I 6 90
gh-1 gold hull and inter- VI+IX 2 H-75 88,170,172
node-1 (VI) Okasshoku(HK)
gh-2 gold hull and inter- X 8 HO-55O Miyazaki 67,73
node-2 No.3 (KY)
gh-3 gold hull and inter- X 8 M-93 Norin-8 71
node-3 mutant(KY)
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P Colored apiculus II 11 I-32 Karalath(HK) 157,172,248,
Pk (purple apiculus I-45 276,280
in the complementary Charanock(HK)
PC action with C and A, A-58 Kokushokuto-
multiple alleles) 2(HK)
P+ H-61
Fusenshiro(HK)
Pa Purple apiculus (III) indica type 20,154,
216
Pau Purple auricle (III) do. 20,23,
25,26,
154
Pc Purple coleoptile (III) do. 20,22,
26,I54
Pg Purple glume (II, do. 20,21.
23
III,IV
V,IX) 24,154
Pin-1 Purple internode-1 II 11 I-33 154,280,
Surjamukhi(HK) 335
(III,IV) indica type
pj Purple junctura (IV,V) do. 22,23,
25,26,
154
pjb Purple junctura back (X) do. 154,334
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pl Purple leaf II 11 A-77 Shito(HK), 21,67,
172
HO-725,729 178,
276,280
Shito(KY)
plw Purple leaf and H-120(HK) 174,
pericarp 178,286
Pli(Pl') Pure leaf I-102 111,280
Fully purple(HK)
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I-pl-1 Inhibitor for VI+IX 2 H-97(HK) 172,
174,
276,280
I-pl-2 purple leaf
I-pl-3 triplicate genes) I E-44
Pirurutong(HK)
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I-pl-4 Inhibitor for I 6 H-190(HK) 280,
282
I-pl-5 purple pericarp
(duplicate genes do.
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I-pl-6 Inhibitor for Most of japonica 111,
purple leaf(PIi) 280
Pla Purple leaf a (IV) indica type 154,
155
Plg Purple ligule (II) do. 21,23,
26,154
Plm(Pla) Purple leaf margin (II) do. 21,154
Pm(Sp) Purple spetum (III) do. 20,261,
154
Pmr(Plm) Purple midrib (II) do. 2l,154
Pn Purple node III 3 A-58 23,66,
172,
276,280
Kokushokuto-2(HK),
HO-850 Kokuto(KY)
Pnr Purple nodal ring indica type 23
Pr Purple hull II 11 A-13 Chabo(HK) 23,160,
276,280
HO-850 Kokuto (KY)
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Prp-a(Pp) Purple pericarp III 3 M-514 Hun-nou 54,154
(complementary genes) (V)
Prp-b(Pb) II 11
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Ps-1 Purple stigmal V E-39 24,154,
216,
231,
(III, Gaisetimochi(HK) 277,280
IV,IX)
Ps-2 Purple stigma-2 II 11 Taichung 65, A-S8 50,51
Kokushokuto-2(HK)
Ps-3 Purple stigma-3 II 11 50,51
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I-Ps-a Inhibitor for purple (VII) Taichung 65, 51
H-59(HK)
I-Ps-b stigma (complementary III 3
genes)
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Psh Purplleaf sheath (II, indica type 20,26,
III,V) 97,154
Pu Purple pulvinus (III) do. 25,154
Px Purple leaf axil (II,III) do. 25,26,
154
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Rc Brown pericarp IV 10 A-5 109,
and seed coat Akamuro(HK) 172,189
Rcs I-33 109,289
Surjamukhi(HK)
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Rd Red pericarp III 3 A-5 109,172
and seed coat
(complementary
action with Rc)
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Wh White hull II 11 L-11 88,172
White hull(HK)
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