![[Home Page]](/images/icons/gramene_logo180new.jpg "[Home Page]"){kind=icon}
QTL Home |
Simple Search |
Power Search |
Help |
Tutorial |
FAQ
Oryza sativa QTL "EQC0023" (spikelet number)
| QTL Accession ID | EQC0023 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||||||||||
| Trait Symbol | SPKNB | ||||||||||||||||
| Trait Name | spikelet number | ||||||||||||||||
| Published Symbol | sn6.1 | ||||||||||||||||
| Trait Synonym(s) |
|
||||||||||||||||
| Trait Category | Yield | ||||||||||||||||
| Chromosome | 6 | ||||||||||||||||
| Comments | The QTL for spikelet number sn6.1 on chromosome 6 coincided with traits influencing the morphological traits in the F2 population derived from cultivated Oryza sativa and the annual wild species O. nivara. The gene action is additive and phenotypic variance is 6.6%. |
Map Positions (2)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 564,135-564,314 bp | View Comparative Map | |||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 6 | 11-21 cM | View Comparative Map | |||
|
||||||||
QTL DB Map Position (1)
| Name | Chromosome | Start | Stop |
|---|---|---|---|
| EQC0023 | 6 | 11 | 21 |
Associated Markers (4)
| Direction | Name | Type | Species | Assoc. Type |
|---|---|---|---|---|
| To | MRG2805 | SSR | Oryza sativa | qtl_marker |
| To | RC6-21 | SSR | Oryza sativa | qtl_marker |
| To | RM469 | SSR | Oryza sativa Japonica Group | qtl_marker |
| To | MRG6023 | SSR | Oryza sativa | qtl_marker |
Associated Genes (0)
Associated Ontologies (6)
| Term Type | Term | Evidence |
|---|---|---|
| Trait Ontology | (TO:0000456) | Li-C et al., 2006 (IAGP) |
| Plant Structure | (PO:0009051 ) | Li-C et al., 2006 (SM) |
| Plant Growth and Development Stage | (PO:0007130 ) | Li-C et al., 2006 (SM) |
| Growth Stage | (GRO:0007044 ) | Li-C et al., 2006 (SM) |
| Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
| Species Ontology | (GR_tax:013681) | Li-C et al., 2006 (SM) |
Database Cross-References (1)
SNPs (0)
