QTL Accession ID | CQAS78 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | YLD |
Trait Name | yield |
Published Symbol | |
Trait Synonym(s) | |
Trait Category | Yield |
Chromosome | 6 |
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 29,502,932-30,796,997 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Cornell 9024/LH422 RI QTL 1996 | BNL6.32 | 6 | 132.9-142.3 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
CQAS78 | 6 | 132.9 | 142.3 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RZ828 | RFLP | Oryza sativa | qtl_marker |
To | RG433 | RFLP | Oryza sativa | qtl_marker |
To | RG653 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000396) | Xiao-J-H et al., 1996 (IAGP) |
Plant Structure | (PO:0009001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007038) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007045) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Xiao-J-H et al., 1996 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr6 | 29,502,932 | 30,796,997 | ~160K SNPs x 20 accessions (McNally 2... | 372 | Search for SNPs |
chr6 | 29,502,932 | 30,796,997 | '1536 chip' - 1311 SNPs x 395 rice ac... | 5 | Search for SNPs |
chr6 | 29,502,932 | 30,796,997 | Huang X, et al, Nat Genetics 2010 Nov... | 3,608 | Search for SNPs |
chr6 | 29,502,932 | 30,796,997 | RiceDiversity 44K SNP assay, 34 trait... | 3,608 | Search for SNPs |
chr6 | 29,502,932 | 30,796,997 | RiceDiversity 44K SNP assay, 34 trait... | 118 | Search for SNPs |