QTL Accession ID | CQAO14 | ||||||
---|---|---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||
Trait Symbol | PBRNB | ||||||
Trait Name | primary branch | ||||||
Published Symbol | nfb8 | ||||||
Trait Synonym(s) |
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Trait Category | Anatomy | ||||||
Chromosome | 8 | ||||||
Comments | The plants were grown in China National Rice Research Institute (CNRRI), Hangzhou, China in 1993. The contributing allele is from parent Tesanai2. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 5,421,297-7,568,613 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNRRI Tes/CB QTL 1997 | BNL6.32 | 8 | 0-15.8 cM | View Comparative Map | |||
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Name | Chromosome | Start | Stop |
---|---|---|---|
CQAO14 | 8 | 0 | 15.8 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RG108 | RFLP | Oryza sativa | qtl_marker |
To | RZ562 | RFLP | Oryza sativa | qtl_marker |
To | RG978 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000547) | Lin-H-X et al., 1996 (IAGP) |
Plant Structure | (PO:0006321) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007130) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007044) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Lin-H-X et al., 1996 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr8 | 5,421,297 | 7,568,613 | ~160K SNPs x 20 accessions (McNally 2... | 537 | Search for SNPs |
chr8 | 5,421,297 | 7,568,613 | '1536 chip' - 1311 SNPs x 395 rice ac... | 4 | Search for SNPs |
chr8 | 5,421,297 | 7,568,613 | Huang X, et al, Nat Genetics 2010 Nov... | 4,812 | Search for SNPs |
chr8 | 5,421,297 | 7,568,613 | RiceDiversity 44K SNP assay, 34 trait... | 4,812 | Search for SNPs |
chr8 | 5,421,297 | 7,568,613 | RiceDiversity 44K SNP assay, 34 trait... | 149 | Search for SNPs |