QTL Accession ID | CQAK8 | ||||
---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
Trait Symbol | DTHD | ||||
Trait Name | days to heading | ||||
Published Symbol | Hd7 | ||||
Trait Synonym(s) |
|
||||
Trait Category | Development | ||||
Chromosome | 2 | ||||
Comments | Detected in BC4F3 population |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 33,613,634-33,908,635 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 2 | 146.1-146.1 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
CQAK8 | 2 | 146.1 | 146.1 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C348 | RFLP | Oryza sativa | qtl_marker |
To | Fl41 | Gene | Oryza sativa | ISS |
To | R3324 | RFLP | Oryza sativa | qtl_marker |
To | G275 | RFLP | Oryza sativa | qtl_marker |
Species | Accession | Name | Evidence |
---|---|---|---|
Oryza sativa | GR:0061238 | Flowering date-41 | Yamamoto-T et al., 2000 (IAGP) |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000137) | Yamamoto-T et al., 2000 (IAGP) |
Plant Structure | (PO:0009049) | Yamamoto-T et al., 2000 (SM) |
Plant Growth and Development Stage | (PO:0007130) | Yamamoto-T et al., 2000 (SM) |
Growth Stage | (GRO:0007044) | Yamamoto-T et al., 2000 (SM) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Yamamoto-T et al., 2000 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr2 | 33,613,634 | 33,908,635 | ~160K SNPs x 20 accessions (McNally 2... | 213 | Search for SNPs |
chr2 | 33,613,634 | 33,908,635 | '1536 chip' - 1311 SNPs x 395 rice ac... | 1 | Search for SNPs |
chr2 | 33,613,634 | 33,908,635 | Huang X, et al, Nat Genetics 2010 Nov... | 107 | Search for SNPs |
chr2 | 33,613,634 | 33,908,635 | RiceDiversity 44K SNP assay, 34 trait... | 107 | Search for SNPs |
chr2 | 33,613,634 | 33,908,635 | RiceDiversity 44K SNP assay, 34 trait... | 47 | Search for SNPs |