QTL Accession ID | CQAJ2 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | YLD |
Trait Name | yield |
Published Symbol | yd8 |
Trait Synonym(s) | |
Trait Category | Yield |
Chromosome | 8 |
Comments | Detected in 1994, in the ratooned F2 population. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 8,156,833-16,537,195 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Zh97/Ming63 CNHZAU F2 QTL 1999 | BNL6.32 | 8 | 80.7-91 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
CQAJ2 | 8 | 80.7 | 91 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C347 | RFLP | Oryza sativa | qtl_marker |
To | C483 | RFLP | Oryza sativa | qtl_marker |
To | RG978 | RFLP | Oryza sativa | qtl_marker |
To | R1629 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000396) | Li-X-H et al., 2000 (IAGP) |
Plant Structure | (PO:0009001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007038) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007045) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Li-X-H et al., 2000 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr8 | 8,156,833 | 16,537,195 | ~160K SNPs x 20 accessions (McNally 2... | 1,758 | Search for SNPs |
chr8 | 8,156,833 | 16,537,195 | '1536 chip' - 1311 SNPs x 395 rice ac... | 21 | Search for SNPs |
chr8 | 8,156,833 | 16,537,195 | Huang X, et al, Nat Genetics 2010 Nov... | 14,022 | Search for SNPs |
chr8 | 8,156,833 | 16,537,195 | RiceDiversity 44K SNP assay, 34 trait... | 14,022 | Search for SNPs |
chr8 | 8,156,833 | 16,537,195 | RiceDiversity 44K SNP assay, 34 trait... | 551 | Search for SNPs |