QTL Accession ID | CQA18 | ||||
---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
Trait Symbol | DTHD | ||||
Trait Name | days to heading | ||||
Published Symbol | QTL7b | ||||
Trait Synonym(s) |
|
||||
Trait Category | Development | ||||
Chromosome | 7 | ||||
Comments | Trait assayed for heading time (HT) defined as the days from sowing to heading. QTL was detected by Composite Interval Mapping (CIM). |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 27,783,170-29,268,073 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | FAUF Gui630/Twj DH QTL 2001 | BNL6.32 | 7 | 114-114 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
CQA18 | 7 | 114 | 114 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C586 | RFLP | Oryza sativa | qtl_marker |
To | C596 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000137) | Zhou-Y et al., 2001 (IAGP) |
Plant Structure | (PO:0009049) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007130) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007044) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Zhou-Y et al., 2001 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr7 | 27,783,170 | 29,268,073 | ~160K SNPs x 20 accessions (McNally 2... | 485 | Search for SNPs |
chr7 | 27,783,170 | 29,268,073 | '1536 chip' - 1311 SNPs x 395 rice ac... | 8 | Search for SNPs |
chr7 | 27,783,170 | 29,268,073 | Huang X, et al, Nat Genetics 2010 Nov... | 3,445 | Search for SNPs |
chr7 | 27,783,170 | 29,268,073 | RiceDiversity 44K SNP assay, 34 trait... | 3,445 | Search for SNPs |
chr7 | 27,783,170 | 29,268,073 | RiceDiversity 44K SNP assay, 34 trait... | 138 | Search for SNPs |