QTL Accession ID | AQQ014 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||||
Trait Symbol | TINB | ||||||||||
Trait Name | tiller number | ||||||||||
Published Symbol | tp11 | ||||||||||
Trait Synonym(s) |
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Trait Category | Vigor | ||||||||||
Chromosome | 11 | ||||||||||
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 2,449,321-3,035,893 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 11 | 140.7-146 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQQ014 | 11 | 140.7 | 146 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C794 | RFLP | Oryza sativa | qtl_marker |
To | R2918 | RFLP | Oryza sativa | qtl_marker |
To | RG118 | RFLP | Oryza sativa | qtl_marker |
To | CDO127 | RFLP | Avena sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000346) | Xing-Z et al., 2002 (IAGP) |
Plant Structure | (PO:0005001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007073) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007049) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Xing-Z et al., 2002 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr11 | 2,449,321 | 3,035,893 | ~160K SNPs x 20 accessions (McNally 2... | 224 | Search for SNPs |
chr11 | 2,449,321 | 3,035,893 | '1536 chip' - 1311 SNPs x 395 rice ac... | 2 | Search for SNPs |
chr11 | 2,449,321 | 3,035,893 | Huang X, et al, Nat Genetics 2010 Nov... | 2,501 | Search for SNPs |
chr11 | 2,449,321 | 3,035,893 | RiceDiversity 44K SNP assay, 34 trait... | 2,501 | Search for SNPs |
chr11 | 2,449,321 | 3,035,893 | RiceDiversity 44K SNP assay, 34 trait... | 56 | Search for SNPs |