QTL Accession ID | AQO010 | ||||||||
---|---|---|---|---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||
Trait Symbol | BIOMYLD | ||||||||
Trait Name | biomass yield | ||||||||
Published Symbol | |||||||||
Trait Synonym(s) |
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Trait Category | Yield | ||||||||
Chromosome | 11 | ||||||||
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 18,318,826-21,426,217 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Aberdeen Bala/Azu QTL 2002 | BNL6.32 | 11 | 76.2-97.8 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQO010 | 11 | 76.2 | 97.8 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RG2 | RFLP | Oryza sativa | qtl_marker |
To | C189 | RFLP | Oryza sativa | qtl_marker |
To | G44 | RFLP | Oryza sativa | qtl_marker |
To | G1465 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000327) | Price-A-H et al., 2002 (IAGP) Price-A-H et al., 2002 (IAGP) |
Plant Structure | (PO:0000003) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007130) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007140) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Price-A-H et al., 2002 (SM) Price-A-H et al., 2002 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr11 | 18,318,826 | 21,426,217 | ~160K SNPs x 20 accessions (McNally 2... | 1,381 | Search for SNPs |
chr11 | 18,318,826 | 21,426,217 | '1536 chip' - 1311 SNPs x 395 rice ac... | 14 | Search for SNPs |
chr11 | 18,318,826 | 21,426,217 | Huang X, et al, Nat Genetics 2010 Nov... | 11,898 | Search for SNPs |
chr11 | 18,318,826 | 21,426,217 | RiceDiversity 44K SNP assay, 34 trait... | 11,898 | Search for SNPs |
chr11 | 18,318,826 | 21,426,217 | RiceDiversity 44K SNP assay, 34 trait... | 329 | Search for SNPs |