Oryza sativa QTL "AQH005" (invitro regeneration ability)

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QTL Accession ID

AQH005

Species

Oryza sativa (Rice) [ GR_tax:013681 ]

Trait Symbol

INVRAB

Trait Name

invitro regeneration ability

Published Symbol

qAGR-10

Trait Synonym(s)

NRS	RR
average number of regenerated shoots per callus	green plant regeneration in anther culture
regeneration rate

Trait Category

Chromosome

Comments

Map Positions (1)

Oryza sativa (1)

Map Type

Map Set

Name

Map

Position

Ext. Links

QTL

BNL6.32

38-50.3 cM

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QTL DB Map Position (1)

Name	Chromosome	Start	Stop
AQH005	10	38	50.3

Associated Markers (5)

Direction	Name	Type	Species	Assoc. Type
To	Gra2	Gene	Oryza sativa	ISS
To	RG323	RFLP	Oryza sativa	qtl_marker
To	C949	RFLP	Oryza sativa	qtl_marker
To	RG241	RFLP	Oryza sativa	qtl_marker
To	RZ400	RFLP	Oryza sativa	qtl_marker

Associated Genes (1)

Species	Accession	Name	Evidence
Oryza sativa	GR:0061072	Green plant regeneration in anther culture-2	KWON-Y et al., 2002 (IAGP)

Associated Ontologies (8)

Term Type	Term	Evidence
Trait Ontology	(TO:0000243)	KWON-Y et al., 2002 (IAGP)
Plant Structure	(PO:0000003)	Gramene curators, 2007 (IC)
	(PO:0009011)	Gramene curators, 2007 (IC)
Plant Growth and Development Stage	(PO:0007033)	Gramene curators, 2007 (IC)
	(PO:0009012)	Gramene curators, 2007 (IC)
Growth Stage	(GRO:0007001)	Gramene curators, 2007 (IC)
Environment	(EO:0007266)	Gramene curators, 2007 (IC)
Species Ontology	(GR_tax:013681)	KWON-Y et al., 2002 (SM)

Database Cross-References (1)

Gramene Literature	KWON-Y, Kim-K, EUN-M, SOHN-J, "QTL mapping and associated marker selection for the efficacy of green plant regeneration in anther culture of rice", Plant Breeding, 2002, vol. 121, pp. 10-16

SNPs (0)