QTL Accession ID | AQGS040 | ||||||||||
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Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||||
Trait Symbol | TINB | ||||||||||
Trait Name | tiller number | ||||||||||
Published Symbol | |||||||||||
Trait Synonym(s) |
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Trait Category | Vigor | ||||||||||
Chromosome | 3 | ||||||||||
Comments | The QTL has been detected from an interspecific BC2 testcross progeny (IR58025/O. rufipogon (IC22015)//IR580325B///KMR3). This locus has the significant interaction with another locus, AQGS041. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 12,407,382-12,407,510 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 3 | 132.5-132.5 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQGS040 | 3 | 132.5 | 132.5 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RM282 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RM36 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RM156 | SSR | Oryza sativa Japonica Group | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000346) | Marri-P-R et al., 2005 (IAGP) |
Plant Structure | (PO:0005001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007073) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007049) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Marri-P-R et al., 2005 (SM) |