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Oryza sativa QTL "AQGP069" (1000-seed weight)
| QTL Accession ID | AQGP069 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||||
| Trait Symbol | TSDWT | ||||||||||
| Trait Name | 1000-seed weight | ||||||||||
| Published Symbol | qGW-2-1 | ||||||||||
| Trait Synonym(s) |
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| Trait Category | Yield | ||||||||||
| Chromosome | 2 | ||||||||||
| Comments | The QTL has been detected from an interspecific BC2F2 population (Hwaseongbyeo/O. rufipogon//Hwaseongbyeo), and its position has been displayed on the IR64/Azucena DH SSR map. The allele from O. rufipogan has negative phenotypic effect. |
Map Positions (2)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 4,305,685-4,305,907 bp | View Comparative Map | |||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 32.7-32.7 cM | View Comparative Map | |||
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QTL DB Map Position (1)
| Name | Chromosome | Start | Stop |
|---|---|---|---|
| AQGP069 | 2 | 32.7 | 32.7 |
Associated Markers (3)
| Direction | Name | Type | Species | Assoc. Type |
|---|---|---|---|---|
| To | RM53 | SSR | Oryza sativa Indica Group | qtl_marker |
| To | RM423 | SSR | Oryza sativa Japonica Group | qtl_marker |
| To | RM555 | SSR | Oryza sativa Japonica Group | qtl_marker |
Associated Genes (0)
Associated Ontologies (6)
| Term Type | Term | Evidence |
|---|---|---|
| Trait Ontology | (TO:0000382) | Cho-Y-C et al., 2003 (IAGP) |
| Plant Structure | (PO:0009010) | Gramene curators, 2007 (IC) |
| Plant Growth and Development Stage | (PO:0007038) | Gramene curators, 2007 (IC) |
| Growth Stage | (GRO:0007045) | Gramene curators, 2007 (IC) |
| Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
| Species Ontology | (GR_tax:013681) | Cho-Y-C et al., 2003 (SM) |
Database Cross-References (1)
SNPs (0)
