QTL Accession ID | AQGF008 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | SDDOR |
Trait Name | seed dormancy |
Published Symbol | qSD1 |
Trait Synonym(s) |
SDDOR dormancy |
Trait Category | Vigor |
Chromosome | 1 |
Comments | Germination of seeds at 30 days after-repening of the BC4F2 (44) population was measured to evaluate seed dormancy and used for QTL analysis. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 4,424,392-4,424,515 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 1 | 39.8-39.8 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQGF008 | 1 | 39.8 | 39.8 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RM220 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RM84 | SSR | Oryza sativa Indica Group | qtl_marker |
To | RM259 | SSR | Oryza sativa Indica Group | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000253) | Gu-X-Y et al., 2005 (IAGP) |
Plant Structure | (PO:0009010) | Gu-X-Y et al., 2005 (SM) |
Plant Growth and Development Stage | (PO:0007132) | Gu-X-Y et al., 2005 (SM) |
(PO:0007057) | Gu-X-Y et al., 2005 (SM) | |
(PO:0007038) | Gramene curators, 2007 (IC) | |
Growth Stage | (GRO:0007045) | Gu-X-Y et al., 2005 (SM) |
(GRO:0007043) | Gu-X-Y et al., 2005 (SM) | |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Gu-X-Y et al., 2005 (SM) |