QTL Accession ID | AQFQ004 | ||||
---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
Trait Symbol | FLNB | ||||
Trait Name | flower number | ||||
Published Symbol | |||||
Trait Synonym(s) |
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Trait Category | Yield | ||||
Chromosome | 9 | ||||
Comments | Number of florets per primary branch was measured to evaluate flower number and used for QTL analysis. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 14,704,764-14,705,036 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 9 | 48.5-68.5 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQFQ004 | 9 | 48.5 | 68.5 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RM566 | SSR | Oryza sativa Japonica Group | qtl_marker |
To | RM5657 | SSR | Oryza sativa Japonica Group | qtl_marker |
To | RM257 | SSR | Oryza sativa Indica Group | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000670) | Yamagishi-J et al., 2004 (IAGP) |
Plant Structure | (PO:0009046) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007016) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007151) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Yamagishi-J et al., 2004 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr9 | 14,704,764 | 14,705,036 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr9 | 14,704,764 | 14,705,036 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr9 | 14,704,764 | 14,705,036 | Huang X, et al, Nat Genetics 2010 Nov... | 1 | Search for SNPs |
chr9 | 14,704,764 | 14,705,036 | RiceDiversity 44K SNP assay, 34 trait... | 1 | Search for SNPs |
chr9 | 14,704,764 | 14,705,036 | RiceDiversity 44K SNP assay, 34 trait... | 0 |