QTL Accession ID | AQFD011 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | TIBUDDOR |
Trait Name | tiller bud dormancy |
Published Symbol | |
Trait Synonym(s) | |
Trait Category | Development |
Chromosome | 2 |
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 25,459,895-27,078,981 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JUT IR36/Genj QTL 2004 | BNL6.32 | 2 | 109.8-119.2 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQFD011 | 2 | 109.8 | 119.2 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C424 | RFLP | Oryza sativa | qtl_marker |
To | C747 | RFLP | Oryza sativa | qtl_marker |
To | R26 | RFLP | Oryza sativa | qtl_marker |
To | R3393 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000661) | Miyamoto-N et al., 2004 (IAGP) |
Plant Structure | (PO:0005001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007073) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007049) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Miyamoto-N et al., 2004 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr2 | 25,459,895 | 27,078,981 | ~160K SNPs x 20 accessions (McNally 2... | 798 | Search for SNPs |
chr2 | 25,459,895 | 27,078,981 | '1536 chip' - 1311 SNPs x 395 rice ac... | 4 | Search for SNPs |
chr2 | 25,459,895 | 27,078,981 | Huang X, et al, Nat Genetics 2010 Nov... | 5,137 | Search for SNPs |
chr2 | 25,459,895 | 27,078,981 | RiceDiversity 44K SNP assay, 34 trait... | 5,137 | Search for SNPs |
chr2 | 25,459,895 | 27,078,981 | RiceDiversity 44K SNP assay, 34 trait... | 199 | Search for SNPs |