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Oryza sativa QTL "AQFA004" (amylose content)
| QTL Accession ID | AQFA004 | ||||
|---|---|---|---|---|---|
| Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
| Trait Symbol | AMYCN | ||||
| Trait Name | amylose content | ||||
| Published Symbol | ac2.1 | ||||
| Trait Synonym(s) |
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| Trait Category | Quality | ||||
| Chromosome | 2 | ||||
| Comments | The increased effect of this QTL was associated with the 'O. glaberrima' allele. |
Map Positions (2)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 34,652,316-34,652,502 bp | View Comparative Map | |||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| QTL | Cornell V20A/glab QTL 2004 | BNL6.32 | 2 | 12.3-12.3 cM | View Comparative Map | |||
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QTL DB Map Position (1)
| Name | Chromosome | Start | Stop |
|---|---|---|---|
| AQFA004 | 2 | 12.3 | 12.3 |
Associated Markers (3)
| Direction | Name | Type | Species | Assoc. Type |
|---|---|---|---|---|
| To | RM213 | SSR | Oryza sativa Indica Group | qtl_marker |
| To | RG520 | RFLP | Oryza sativa | qtl_marker |
| To | CDO1091 | RFLP | Avena sativa | qtl_marker |
Associated Genes (0)
Associated Ontologies (6)
| Term Type | Term | Evidence |
|---|---|---|
| Trait Ontology | (TO:0000196) | Li-J et al., 2004 (IAGP) |
| Plant Structure | (PO:0009010) | Li-J et al., 2004 (SM) |
| Plant Growth and Development Stage | (PO:0007038 ) | Li-J et al., 2004 (SM) |
| Growth Stage | (GRO:0007045) | Li-J et al., 2004 (SM) |
| Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
| Species Ontology | (GR_tax:013681) | Li-J et al., 2004 (SM) |
Database Cross-References (1)
SNPs (0)
