QTL Accession ID | AQF079 | ||||
---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
Trait Symbol | GRYLD | ||||
Trait Name | grain yield | ||||
Published Symbol | |||||
Trait Synonym(s) |
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Trait Category | Yield | ||||
Chromosome | 7 | ||||
Comments | Related with life-history trait. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 2,081,175-2,634,193 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JNIG W1944/Peik QTL 2002 | BNL6.32 | 7 | 0-25 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQF079 | 7 | 0 | 25 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C1057 | RFLP | Oryza sativa | qtl_marker |
To | RG128 | RFLP | Oryza sativa | qtl_marker |
To | RZ387 | RFLP | Oryza sativa | qtl_marker |
To | CDO385 | RFLP | Avena sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000396) | Cai-W et al., 2002 (IAGP) |
Plant Structure | (PO:0009001) | Cai-W et al., 2002 (SM) |
Plant Growth and Development Stage | (PO:0007038 ) | Cai-W et al., 2002 (SM) |
Growth Stage | (GRO:0007045) | Cai-W et al., 2002 (SM) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Cai-W et al., 2002 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr7 | 2,081,175 | 2,634,193 | ~160K SNPs x 20 accessions (McNally 2... | 82 | Search for SNPs |
chr7 | 2,081,175 | 2,634,193 | '1536 chip' - 1311 SNPs x 395 rice ac... | 1 | Search for SNPs |
chr7 | 2,081,175 | 2,634,193 | Huang X, et al, Nat Genetics 2010 Nov... | 1,151 | Search for SNPs |
chr7 | 2,081,175 | 2,634,193 | RiceDiversity 44K SNP assay, 34 trait... | 1,151 | Search for SNPs |
chr7 | 2,081,175 | 2,634,193 | RiceDiversity 44K SNP assay, 34 trait... | 37 | Search for SNPs |