QTL Accession ID | AQEO021 |
---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
Trait Symbol | HSDWT |
Trait Name | 100-seed weight |
Published Symbol | |
Trait Synonym(s) | hundred seed weight |
Trait Category | Yield |
Chromosome | 4 |
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 31,065,233-34,698,383 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | UCD Lab/Bla QTL 1998 | BNL6.32 | 4 | 116-166 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQEO021 | 4 | 116 | 166 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RG476 | RFLP | Oryza sativa | qtl_marker |
To | RG620 | RFLP | Oryza sativa | qtl_marker |
To | RZ740 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000269) | Redona-E-D et al., 1998 (IAGP) |
Plant Structure | (PO:0009010) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007038) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007045) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Redona-E-D et al., 1998 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr4 | 31,065,233 | 34,698,383 | ~160K SNPs x 20 accessions (McNally 2... | 1,611 | Search for SNPs |
chr4 | 31,065,233 | 34,698,383 | '1536 chip' - 1311 SNPs x 395 rice ac... | 18 | Search for SNPs |
chr4 | 31,065,233 | 34,698,383 | Huang X, et al, Nat Genetics 2010 Nov... | 8,815 | Search for SNPs |
chr4 | 31,065,233 | 34,698,383 | RiceDiversity 44K SNP assay, 34 trait... | 8,815 | Search for SNPs |
chr4 | 31,065,233 | 34,698,383 | RiceDiversity 44K SNP assay, 34 trait... | 393 | Search for SNPs |