QTL Accession ID | AQEB014 | ||||||||||
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Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||||
Trait Symbol | TSDWT | ||||||||||
Trait Name | 1000-seed weight | ||||||||||
Published Symbol | |||||||||||
Trait Synonym(s) |
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Trait Category | Yield | ||||||||||
Chromosome | 11 | ||||||||||
Comments | This QTL was detected using 1998 phenotypic data. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 8,859,470-20,012,442 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 11 | 58.4-80.2 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQEB014 | 11 | 58.4 | 80.2 |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000382) | Ishimaru-K, 2003 (IAGP) |
Plant Structure | (PO:0009010) | Ishimaru-K, 2003 (SM) |
Plant Growth and Development Stage | (PO:0007038) | Ishimaru-K, 2003 (SM) |
Growth Stage | (GRO:0007045) | Ishimaru-K, 2003 (SM) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Ishimaru-K, 2003 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr11 | 8,859,470 | 20,012,442 | ~160K SNPs x 20 accessions (McNally 2... | 4,232 | Search for SNPs |
chr11 | 8,859,470 | 20,012,442 | '1536 chip' - 1311 SNPs x 395 rice ac... | 35 | Search for SNPs |
chr11 | 8,859,470 | 20,012,442 | Huang X, et al, Nat Genetics 2010 Nov... | 28,552 | Search for SNPs |
chr11 | 8,859,470 | 20,012,442 | RiceDiversity 44K SNP assay, 34 trait... | 28,552 | Search for SNPs |
chr11 | 8,859,470 | 20,012,442 | RiceDiversity 44K SNP assay, 34 trait... | 979 | Search for SNPs |