QTL Accession ID | AQDV011 | ||||
---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
Trait Symbol | DTHD | ||||
Trait Name | days to heading | ||||
Published Symbol | qHDD4-1 | ||||
Trait Synonym(s) |
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Trait Category | Development | ||||
Chromosome | 4 | ||||
Comments | This QTL was detected in four different locations. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 8,610,617-13,635,012 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 4 | 10.6-28.3 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQDV011 | 4 | 10.6 | 28.3 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RG190 | RFLP | Oryza sativa | qtl_marker |
To | RG91 | RFLP | Oryza sativa | qtl_marker |
To | RG908 | RFLP | Oryza sativa | qtl_marker |
To | RZ262 | RFLP | Oryza sativa | qtl_marker |
To | RG449 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000137) | Hittalmani-S et al., 2003 (IAGP) |
Plant Structure | (PO:0009049) | Hittalmani-S et al., 2003 (SM) |
Plant Growth and Development Stage | (PO:0007041) | Hittalmani-S et al., 2003 (SM) |
(PO:0007130) | Gramene curators, 2007 (IC) | |
Growth Stage | (GRO:0007044) | Hittalmani-S et al., 2003 (SM) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Hittalmani-S et al., 2003 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr4 | 8,610,617 | 13,635,012 | ~160K SNPs x 20 accessions (McNally 2... | 991 | Search for SNPs |
chr4 | 8,610,617 | 13,635,012 | '1536 chip' - 1311 SNPs x 395 rice ac... | 10 | Search for SNPs |
chr4 | 8,610,617 | 13,635,012 | Huang X, et al, Nat Genetics 2010 Nov... | 8,032 | Search for SNPs |
chr4 | 8,610,617 | 13,635,012 | RiceDiversity 44K SNP assay, 34 trait... | 8,032 | Search for SNPs |
chr4 | 8,610,617 | 13,635,012 | RiceDiversity 44K SNP assay, 34 trait... | 282 | Search for SNPs |