QTL Accession ID | AQDQ047 | ||||
---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
Trait Symbol | GRYLDPPL | ||||
Trait Name | grain yield per plant | ||||
Published Symbol | gwt5 | ||||
Trait Synonym(s) |
|
||||
Trait Category | Yield | ||||
Chromosome | 5 | ||||
Comments | This QTL was detected using phenotypic data of F2 population at the China National Rice Research Institute (CNRRI). |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 18,874,932-24,262,670 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNRRI Tes/CB QTL 1997 | BNL6.32 | 5 | 89.6-122.9 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQDQ047 | 5 | 89.6 | 122.9 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RG13 | RFLP | Oryza sativa | qtl_marker |
To | RG573 | RFLP | Oryza sativa | qtl_marker |
To | RZ70 | RFLP | Oryza sativa | qtl_marker |
To | RG182 | RFLP | Oryza sativa | qtl_marker |
To | RG470 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000449) | Zhuang-J-Y et al., 1997 (IAGP) |
Plant Structure | (PO:0009001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007038) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007045) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Zhuang-J-Y et al., 1997 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr5 | 18,874,932 | 24,262,670 | ~160K SNPs x 20 accessions (McNally 2... | 3,501 | Search for SNPs |
chr5 | 18,874,932 | 24,262,670 | '1536 chip' - 1311 SNPs x 395 rice ac... | 18 | Search for SNPs |
chr5 | 18,874,932 | 24,262,670 | Huang X, et al, Nat Genetics 2010 Nov... | 9,500 | Search for SNPs |
chr5 | 18,874,932 | 24,262,670 | RiceDiversity 44K SNP assay, 34 trait... | 9,500 | Search for SNPs |
chr5 | 18,874,932 | 24,262,670 | RiceDiversity 44K SNP assay, 34 trait... | 616 | Search for SNPs |